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berkeley_reactor_200306_planktonic_scaffold_37596_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(25290..27038)

Top 3 Functional Annotations

Value Algorithm Source
Membrane-fusion protein id=4384351 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 404.0
  • Bit_score: 327
  • Evalue 1.50e-86
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 418.0
  • Bit_score: 314
  • Evalue 3.80e-83
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 425.0
  • Bit_score: 368
  • Evalue 1.10e-98

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1749
ATGAAGACCCAATCCTATTTTAAAACCGCTGGGTTCTTGCTGGCGTTGATCGTGTTGGCCGGCGGCGGCTGGTTGATCGCGGGCTGTTCCAAATCGGCGGAGCAGACCGCGTCGCAGCCCAAGACGCTTTACACCTGCGGCATGCATCCGCAGGTCATTCAGGATCATCCGGGCAACTGCCCGATTTGCGGCATGAAACTGACGCCCATTCGCAATCCCGCTTCCGCCGGGGCTGCGGCGGCCGCCGCCAGTTCGTCGGCAATTCAAGTGGACCCGGTGACGATTCAAAACATGAACATCCAGACCACCACAGTGCGGCGCGGGCCGCTGCGCCGGATCATTCGCACGGTGGGCACGATTGCCTACAACGAGACGACGCTGGCGGATGTCACCACCAAGTTCAAGGGCTGGATTGAAAAACTGGACGTGGATGCGACCGGGCAGTTGGTGCATCGCGGCGAGCCGTTGTTCGATATTTATTCGCCCGAACTCTACAGCGCCGAGGTCGAATACCTGCTCACCTTGAAACAAGGTTCCACCAACGACTCCGGCGCGGTGGTGCTGCGCGAAACGGCGGCGAACAAGCTGAAGTTTTACGATATTTCCGAGGCGCAGATTGCCGAACTGGAAAAAACCGGCAAACCGCGCAAGACACTGCAAATCCTCGCGCCAATTGACGGGTTCGTGATCGAGAAGAACGTCGTGCAAGGCCAGATGGTGGATGGCGGTATGAAGTTATATAAGCTGGCCGATTTGGGAATCGTCTGGGTTTATGCGCAGATTTACGAGCAGGACCTGCCCTACATCAAGCTGGGGCAGGAGGCGGTGGTGAAGCTGGCGTCGCTGCCCGATCGCGAATTTCGCGGGCGCGTGACCTATGTTTATCCGAACGTGGATGAAAAAACGCGCACGGCCAAGGTGCGGTTGGAATTTGAAAACCCCGGTTACTTCCTTAAGCCGGGCATGTTCGTCTCGGTGCAGATCACGTCCGAGCTGGAACCGTCCGCATTGCTGGTGCCGGATTCGGCGATCTTGCGCAGCGGCGAGAAGAACACGGTGTTTGTGGCGTTGCCCGGCGGCAAGTTCGATCCGCGCACGGTGACGCTCGGGCCGGAAGCGGAGCACGATCAGTATGAAGTCGTCAGCGGCTTGCGGGCCGGCGAACGCATCGTTACTTCCGGCCAGTTCCTGCTCGATTCGGAAAGCCAGTTGCGCGAGGCGATTCAGAAAATGCGCGCGCCGGCGGCGGCCACGGCCACAATGACCATGCCGGCCAGCACGAACCTGACCAGCATGGAACCGGTCTCAGCCACCAACGTCGTGAAGGAGGCCACGGTTTACGTTTGCCCAATGCCGGCGCATGTTTCCATCACCTACGATCATCCCGGCAACTGCCCGATTTGCGGCATGGCGCTGGTGCCGGTGACGCCGGCGGAACTTAAGCAGCTTCAGCCGGGCGGCGAGGTGCTTTATTACACCTGCCCGATGCCGGAACACAGCAGCGTGCACTCGGACAAGCCGGGGAAATGTCCGATCTGCGGGATGACGCTGATTCCGGTGATGGCCGCGCCCGGGACCAGACCCGAGACAAATCAACCTGCAGCCAGCACGCCAACCAATCCGCCTCCGTCAACGGCGAAGACGGAAACCAAAACCCTTTACACCTGTCCGATGCATCCGCAGATCATTTCTGACAAACCGGGCAAGTGTCCGATTTGCGGAATGAATCTGGTGCCGATTAAGAAATAA
PROTEIN sequence
Length: 583
MKTQSYFKTAGFLLALIVLAGGGWLIAGCSKSAEQTASQPKTLYTCGMHPQVIQDHPGNCPICGMKLTPIRNPASAGAAAAAASSSAIQVDPVTIQNMNIQTTTVRRGPLRRIIRTVGTIAYNETTLADVTTKFKGWIEKLDVDATGQLVHRGEPLFDIYSPELYSAEVEYLLTLKQGSTNDSGAVVLRETAANKLKFYDISEAQIAELEKTGKPRKTLQILAPIDGFVIEKNVVQGQMVDGGMKLYKLADLGIVWVYAQIYEQDLPYIKLGQEAVVKLASLPDREFRGRVTYVYPNVDEKTRTAKVRLEFENPGYFLKPGMFVSVQITSELEPSALLVPDSAILRSGEKNTVFVALPGGKFDPRTVTLGPEAEHDQYEVVSGLRAGERIVTSGQFLLDSESQLREAIQKMRAPAAATATMTMPASTNLTSMEPVSATNVVKEATVYVCPMPAHVSITYDHPGNCPICGMALVPVTPAELKQLQPGGEVLYYTCPMPEHSSVHSDKPGKCPICGMTLIPVMAAPGTRPETNQPAASTPTNPPPSTAKTETKTLYTCPMHPQIISDKPGKCPICGMNLVPIKK*