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berkeley_reactor_200306_planktonic_scaffold_37596_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 32776..33363

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 169
  • Evalue 3.10e-39
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 169
  • Evalue 4.30e-39
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 194.0
  • Bit_score: 161
  • Evalue 1.80e-37

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Taxonomy

uncultured Acidobacteria bacterium A11 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAGCATCACAATTGATAGCGAAGCTCAAGACCGGGCGGACATGGAGCGTTTGCAGGCCGGCCAGGAAGCGGCGCTGAACGATTTGATGGAACGCCACGCCACGCCGGTTTTTCATTTCCTTTGCCGCATGGTGGGAAATGAGGACGACGCCAGCGATCTCACGCAGGAAACATTTGTCCGCGTGTTCAAGTCGTGTCACAGCTTCCGCACGCATCAAAAATTTTCCACCTGGCTGTTCACCATCGCCGCCAATCTGGCGCGCAACCATTTCCGCTGGCGTTCGCGACATCCGAATCTTTCGCTCGACGCGGAAAATCCCGAGACCGGACAATCGCTCGGCAGCACGCTGCCGGCCAGTTCTCTGGCGCCCAGCGAGGAGGCACTGGCGGATGAACGAGCCCGCGCTGTCCGTTCCGCCATAAAAACGCTGCCGGAAGATTTACGAGAAGCCATCGTGCTGTGCGAATGGGAGGAACGCAGCATCGCCGAAGCGGCGACCATTCTGGAAGCGACGCCCAAGGCGATTGAGTCGCGGCTTTATCGCGCCCGCGGCATCCTGCGCGAAAAACTGAAGCGCTGGTTGTAA
PROTEIN sequence
Length: 196
MSITIDSEAQDRADMERLQAGQEAALNDLMERHATPVFHFLCRMVGNEDDASDLTQETFVRVFKSCHSFRTHQKFSTWLFTIAANLARNHFRWRSRHPNLSLDAENPETGQSLGSTLPASSLAPSEEALADERARAVRSAIKTLPEDLREAIVLCEWEERSIAEAATILEATPKAIESRLYRARGILREKLKRWL*