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berkeley_reactor_200306_planktonic_scaffold_58787_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(24924..25310)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003797AB8 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 120.0
  • Bit_score: 96
  • Evalue 1.30e-17
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 118.0
  • Bit_score: 96
  • Evalue 4.70e-18
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AFK06107.1}; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 118.0
  • Bit_score: 96
  • Evalue 2.30e-17

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Taxonomy

Mesotoga prima → Mesotoga → Kosmotogales → Thermotogae → Thermotogae → Bacteria

Sequences

DNA sequence
Length: 387
ATGAAGAATAAGGTGAAAATTTTGGTTGTGGACGACGAAATTGCTGTTGCTTCAATGATGGTATTCTTGCTTACGCGGGAAGGTTTTGAAGTCGAGGCCGCTCTGAATGCTGAAAAAGCCTTGCGGCTGGCCACGTCGAATGAGTTCGATCTGATCACACTTGATGAGGGCATGCCGGGCATCAACGGTTTTGACCTGTTTCAACGCTTGAAAAATCTTCCTCAATTGCGAGAGACCACTGTCATTTTCGTCTCGGGCAACGCCTCCATCGAGATTCAGCAGCAAGCCTTGGAACTTGGAGCGGCTGATTTCATAGAGAAGCCCTTTGGAGCATCCGAATTCATTACACGTATTCATTCTTTAGTGGGAACGACGGCAACGGCATGA
PROTEIN sequence
Length: 129
MKNKVKILVVDDEIAVASMMVFLLTREGFEVEAALNAEKALRLATSNEFDLITLDEGMPGINGFDLFQRLKNLPQLRETTVIFVSGNASIEIQQQALELGAADFIEKPFGASEFITRIHSLVGTTATA*