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berkeley_reactor_200306_planktonic_scaffold_58787_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 26352..27026

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family id=2786760 bin=GWF2_Melioribacter_38_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 214.0
  • Bit_score: 137
  • Evalue 1.10e-29
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 209.0
  • Bit_score: 129
  • Evalue 8.80e-28
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 214.0
  • Bit_score: 137
  • Evalue 1.60e-29

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Taxonomy

RIFOXYC2_FULL_Ignavibacteria_38_25_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 675
ATGATGGTTGGAGCGACGACAGGCAAAGCAATTACTAATGTTGTTGTGGTGGAGGACGACGCCGATGCGCGATTGTGCCTTTTCGACATTCTACAAGAATCCTGTGTTTTCAACTGCATTGGAACTTTTTCAAATGCGGCTGATGCTTTGGCAGACATCCCGCGGCTTCTTCCTGACTTGGTGTTAATGGACATTCGGTTGCCTGGTCTGAGCGGCATCGAATGCACAAGACTGCTTAAGCATCTGCTCCCTTCCCTCAAAATTGTCATGGTCACCGGAATGCACGATGACAATTCAATTCAAAATTCGTTGAATGCAGGAGCGCTTGCTTATCTGGTTAAACCGGTAGTTCCGGAACAATATTTGACAACCTTAAAGTGCGTAATGGCAACCAATGCGCATCCGATTCCCAATTCGGGTAGCTCAAACGAAAATCTAAAACCCGCTGCCTCGTTGGAAGCGAGTTTCTTACTCACAAATCGTGAAAACGAAGTCATGAGGCATTTTGCGGAAGGGCTGCTTTACAAAGAGATTGCGGAGAAAATGAACATCAGCTATTCGGCTGTTCACAAACTCCAGCATAAAATTTTTGGAAAACTTCGGGCGGGAAACCGAACAGAGGCCATTTTGAAGTGGCGTGCGAGTTTGAAACAATTTACTGATCTGACTCCATGA
PROTEIN sequence
Length: 225
MMVGATTGKAITNVVVVEDDADARLCLFDILQESCVFNCIGTFSNAADALADIPRLLPDLVLMDIRLPGLSGIECTRLLKHLLPSLKIVMVTGMHDDNSIQNSLNAGALAYLVKPVVPEQYLTTLKCVMATNAHPIPNSGSSNENLKPAASLEASFLLTNRENEVMRHFAEGLLYKEIAEKMNISYSAVHKLQHKIFGKLRAGNRTEAILKWRASLKQFTDLTP*