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berkeley_reactor_200306_planktonic_scaffold_58787_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 25836..26087

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI06_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 71.0
  • Bit_score: 73
  • Evalue 5.70e-11
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EEF60499.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 71.0
  • Bit_score: 73
  • Evalue 8.10e-11
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 59.0
  • Bit_score: 62
  • Evalue 4.90e-08

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 252
GTGGCCGCTCCCTGCTTGGCTTTATGGCCAATCGTGGTCACAAAAAAAGATCGTAAACTCTTAGGTGAAGGCATCCGCAAGCACCGCAAGCTGGCTGGCCTAACACAAGAAAAGCTGGCTGAACGCATTGACATCAACCCCGTCTACATGGGGCAGATTGAACGCGGCTATCGGGTGCCCACTGTGGATGTGCTCCTGCGTATTGCTCGGGCGCTGAAAGTTCACTTGAGGGATATTTTTAGCGAACTTTGA
PROTEIN sequence
Length: 84
VAAPCLALWPIVVTKKDRKLLGEGIRKHRKLAGLTQEKLAERIDINPVYMGQIERGYRVPTVDVLLRIARALKVHLRDIFSEL*