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berkeley_reactor_200306_planktonic_scaffold_58787_52

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 71791..75588

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Autotransporter-associated beta strand n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V4E7_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 1348.0
  • Bit_score: 327
  • Evalue 5.70e-86
Autotransporter-associated beta strand {ECO:0000313|EMBL:EZP43719.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.8
  • Coverage: 1233.0
  • Bit_score: 347
  • Evalue 7.50e-92
autotransporter protein similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 1402.0
  • Bit_score: 326
  • Evalue 2.10e-86

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3798
ATGAATACCTCAAAATTGAAATACCTGGCGTTTGCCTGTCTCACCTTCGGCGTTGGCACGATTGCGATGCGGGCGGCTGACGTTTCGCTGACGGCCGGAGACGGTCTGGGAAGCTCATCCTTCAACACGGCGGGCCATTGGGACAACCTGCTGGCACCCGCCGCCGGCAACCATTATTTCACGGCCAACTATCGTTTGCGGACGCCGCCCGACGGCAACAGCTACACGTTTGGCGGGGATTCGCTGACCGCCAACAACACGCCCGCCACGGACGGTTCGGTGGGCATCGCGTTCAAGGGCACCGGCACCACGGGAATTCTCACGGCGAACTGGATTCTCGATGGCGGGCAGATTTACACCTTGAACGGAGTGAACGATCTGCTCCAACTGGCCGGCACCCTGAATGTCACCGCCAATGGCGGCCAGCTTTGGGCCAAGCAGGGGGACATGAACGTCCTGGCCCCCATGAGCGGCACGGGCATCGTGACGATTCCCAACACGGATGCCCCGACCGAAACCACGCGCCGGTTTGTGAATCTGCTCGGCGACAACTCGGCGTTCACGGGGAAGTGGGACGTGCTGGGAAAACTGAGCATTATCTCGGAAGCGAGTTTGGGCGGTAATCCCGCCGGTTTTGCCGCCGACCAATTGACGTTGGACGGCGGTATTTTGATGACGACGAACACGTTCGCGATCAACGACAGCAATCGCGGCATCACCCTCGGTGCGGGCGGCGGCACTTTCAACGTGGCAAACCCGGACACCAACACGGTCGCGGCCTTGACCATCGCCAGTCCCATCACGGGCTCCGGCCTGCTCACGAAGGTTGGCGGCGGCACGTTGACGCTTTCGGGGAACAATGATTTTTCGGGCGGCGTGGTCGTAACTGCGGATTCACAGTTGAATTTGAACAGCGCGACGGCTCCGGGCTACGGCGCGATCACGTTCAACGGCGGCTCCACCTTGCTCGACAATACCAGCGGCTCCGACGTGACGCTGGCCAACGGCAACAGTATGAGCTGGTATGGCAACGTCACCTTTTTGGGATCGAGCAGCCTGGATCTGGGTTCCGGCGCGGCAACGCTCTACGCGGATGCCGTCGTCGCGGTTTCGAACAACAATTTGACGATTGGCGGCGGCTTGAACGGGGATGGCAATGGGCGCTCGTTGACCAAGGCGGGAGCGGGCACGCTGACCATCAGCTACGGCGGTTATTATGCCGGCAACACGCTGGTCAATGAAGGCACGCTGGCCTTCACGAACGGCGCCTACCTGTCCAGTCCCACGATTCTGGTGGCGTCCAACGCCACCATGGACGTGGCTTCGGGAGGTGGAATGAACTTGAACTATGCCCAAATCCTCACCGGTGACGGCACCGTGGTGGGAGATATTTCGGACGGTTCGGGGAACGACGCAATCAATCCCGGCACCGGCGTTGGCACCTTGACGATCAACGGGAATTTGAATCTTTACGGCAACGGCACGCTTAATTTTCAATTGGGAGCGGACACCACCGCGGGCGGCGGCGTCAATGACCTGCTTGTCGTTGGCGGGCAGTTGAATCTGGCCGGCGCCACCACGTTGAACGTGGCGGGCACGCCGTCGGTCGGCACCTACACGCTGATCCAGTATCGCACTTTTTCCGGTGACCTCGCGAACCTGACGCCGCCGCCCGGTTACGCGTTGCAGAACAACCCGACGGCGCACACCATCGAACTGGTTGTGACGCACGTCCCGGCGAGCCTGACCTGGCGTGGTGACGGCACTGTCAATGCGTGGGATCTGGCCGGCACGGCCAACTGGCTCCTGGCCGGCACGAATCAATTTTTCTACACGGGCGACACCGTGACCTTTGATGACTCGGGCTCGAACACGCCGGCCATTACGCTGGGGGCGGATATTTCACCGGCATCGGTCACCGTGGATTCCTCGCAAAATTACAGTTTCTCCGGAGGCGGAATTCGCACTGGCAGCCTGACCAAGGACGGCGCGGGCACCTTGGTGCTGGATGACACCAACACGTATTCCGGTCTCACCGTCATCAATGGCGGAACATTGCAGTTGGGGGATCCTTCGGGATACTACGCCGGCACGGCGGGTTCCGTCGGGTCGGGCACGGTGACCAACAACGCCAGCCTGGTGGTGAATCACACCGACACGCTGATGCTCGGCAATGTCATCAACGGCTCCGGCACGCTTTCCCAGATTGGCACGGGCGCCACGGTGCTTTCCGGCAGCAACAGCTACAGCGGCGAAACCATCGTCAGCTCGGGTTCATTGCAGGTGGCCAACAACGCGGCACTCGGATCCACCAATGGCGGCACGCTGGTGGAAGGCAGCGGACAGCTTGCCTGCTATGGAACGCAAACGATTGATGAGAATCTGACCTTGAACCCCGCCGACTCGTCCAACTACGTGTTGCGCAACGGGGGAAATCAAACGTTCGTCATCAACGGAACCATCGCGTTGAACAGCGATTCCGCAATCCAGGTGGACAACGGTTCCACCATGGTGTTCTCCAACGAAGTCAGCGGCCCGGGCGCGCTGGTGAAGAACGTCGGCGGCACCCTGACGCTCGCCGCCTCCAACACGTTCAGCGGCGGCATCAGCGTCAACGCGGGCACCTTGGTCCTGGCCAATGACAACGCGATGGGCAGCAATTCGCAGATCGTGGTCAGCAGCACCACCGGCGGCCCCGGCCTCTCCGGCACGCGGGTGACCTTGTCCGGCGGAGTGACGATTCCCGCGACCAAATCGGTGAATCTGCCGTCCAGCGGCGCCGGCACGATCCGTTCCACCATTGTTGGAACGGGCGTCGGCGTCACCAATGTCTGGGCCGGCACCATCACCATTTCCGGCGACAGCTCCGGCGTGGAAGCCAACCAGGTCGGGTTTGGGGTGGATGCCAGTTCAACCTTTGTCATCAGCGGTCCGGTCACGACCGACGGCACCTTCCCCGGCGGCAAGATCAACATCCGCGGCAACAGCACCGGGGTGGGCATTCTCGCCGGCCAGGTGACTCTGGCGCCGAACGGCCAGATTCAAGTGGATGACGGTTCCACCTGGATCGTGGCCTCCACCGGAAACACCTGGGGAACGAACCGCATTGTGAATGGCACTTTGAAACTGGGCGCGAACGACGCCCTGCCGACGGCGTCCTACGTGACGGACAATTCCCGCTTTGACCTGGCGGGCTATAATCAGACGATTGCCGGATTGAACTCCGGTTGCACGATTACGAACAGCAGTGCCACGTCGGACTCGACGCTGAGTTATTCCAGCGCCGGCACGTCCGCCTTCACCGGCAGCATCCGGGATGGCGTCAGGAAGATGAATCTCACCATCGCGGCCGGGACGCTCACGTTGTCGAGTGCCGCCACTTTGAACATCGCCAAATCCACGATCACGGTAAACAGCGGCGGGGTTCTGGATCTGGAGTTCGCGGGCACGAACACCGTGGCCGGCCTGGTGTTGAACGGCGTCAGCCAGGCACCGGGCGTTTACAGCGCGGCTGGCAGCTCGCCTTACCTGGCGGGAACGGGCTATTTGCAGGTGGCAAATCCGATTCCAACGACACCCACCAACATCACCTTCAGCGTGAGTGGCGGCAAGTTGGCGCTCTCCTGGCCGGCGGACTATGCCGGCTGGATTCTGCAATCGCAGACCAACAGCTTGTCCACCGGGTTGAACACGAACTGGGTGGATGTGCCCGGCAGCGAAAGCATCACCGCCACGAACATCACCATTGATCCGTCCCGGCCGGTCGTGTTCTACCGGTTGCGCTATCCGAATCCGTAA
PROTEIN sequence
Length: 1266
MNTSKLKYLAFACLTFGVGTIAMRAADVSLTAGDGLGSSSFNTAGHWDNLLAPAAGNHYFTANYRLRTPPDGNSYTFGGDSLTANNTPATDGSVGIAFKGTGTTGILTANWILDGGQIYTLNGVNDLLQLAGTLNVTANGGQLWAKQGDMNVLAPMSGTGIVTIPNTDAPTETTRRFVNLLGDNSAFTGKWDVLGKLSIISEASLGGNPAGFAADQLTLDGGILMTTNTFAINDSNRGITLGAGGGTFNVANPDTNTVAALTIASPITGSGLLTKVGGGTLTLSGNNDFSGGVVVTADSQLNLNSATAPGYGAITFNGGSTLLDNTSGSDVTLANGNSMSWYGNVTFLGSSSLDLGSGAATLYADAVVAVSNNNLTIGGGLNGDGNGRSLTKAGAGTLTISYGGYYAGNTLVNEGTLAFTNGAYLSSPTILVASNATMDVASGGGMNLNYAQILTGDGTVVGDISDGSGNDAINPGTGVGTLTINGNLNLYGNGTLNFQLGADTTAGGGVNDLLVVGGQLNLAGATTLNVAGTPSVGTYTLIQYRTFSGDLANLTPPPGYALQNNPTAHTIELVVTHVPASLTWRGDGTVNAWDLAGTANWLLAGTNQFFYTGDTVTFDDSGSNTPAITLGADISPASVTVDSSQNYSFSGGGIRTGSLTKDGAGTLVLDDTNTYSGLTVINGGTLQLGDPSGYYAGTAGSVGSGTVTNNASLVVNHTDTLMLGNVINGSGTLSQIGTGATVLSGSNSYSGETIVSSGSLQVANNAALGSTNGGTLVEGSGQLACYGTQTIDENLTLNPADSSNYVLRNGGNQTFVINGTIALNSDSAIQVDNGSTMVFSNEVSGPGALVKNVGGTLTLAASNTFSGGISVNAGTLVLANDNAMGSNSQIVVSSTTGGPGLSGTRVTLSGGVTIPATKSVNLPSSGAGTIRSTIVGTGVGVTNVWAGTITISGDSSGVEANQVGFGVDASSTFVISGPVTTDGTFPGGKINIRGNSTGVGILAGQVTLAPNGQIQVDDGSTWIVASTGNTWGTNRIVNGTLKLGANDALPTASYVTDNSRFDLAGYNQTIAGLNSGCTITNSSATSDSTLSYSSAGTSAFTGSIRDGVRKMNLTIAAGTLTLSSAATLNIAKSTITVNSGGVLDLEFAGTNTVAGLVLNGVSQAPGVYSAAGSSPYLAGTGYLQVANPIPTTPTNITFSVSGGKLALSWPADYAGWILQSQTNSLSTGLNTNWVDVPGSESITATNITIDPSRPVVFYRLRYPNP*