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berkeley_reactor_200306_planktonic_scaffold_58787_90

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 113186..113884

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 228.0
  • Bit_score: 368
  • Evalue 5.80e-99
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRV5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 228.0
  • Bit_score: 368
  • Evalue 4.10e-99
uroporphyrin-III C/tetrapyrrole methyltransferase similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 226.0
  • Bit_score: 245
  • Evalue 8.70e-63

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 699
ATGGACGCCGCCCAACTGCCGCCCCTTACGCCCGGCACGCTTTACCTCGTGGCCACGCCGATTGGCAATCTCGAGGACATCACGCTGCGCGCGCTGCGCGTCCTGCGCGAGTGCGACGTGGTGGCCGCCGAGGACACCCGCCGCTCCGGCCAGTTGCTCAAGCATTTTGAAATCGCCAAACCGCTCCTGAGTTATTTCCAATTCAACGAGGCGAAGCGCAGCGAGGAAATCATCGAACGCCTCCGGCGCGGCGAAAAAATCGCGCTGGTCACCGACGCCGGCAGCCCCGGTATCAGCGATCCCGGGGAACGCGTGGTGAAAGCCGCCATCGCCGCCGGGTTTCGCGTGGAAGCCGTGGCCGGCCCGTGCGCCCTGGTGGCCGCGCTGACGGCCAGCGGATTGCCGGCGGACGAGTTTCATTTCGTCGGTTTTCTCCCGCACAAATCCGGCCAGCGACGCAACCAACTGGCATCACTCAAAACCGTTCCCGGCACGCTGGTGTTTTATGAATCGCCGTATCGCATTGAAAAGCTGCTGGGCGAATTGAACGAAGTTTTTCCGGAGCGCGACGTGGTTTTGGCCCGTGAATTGACCAAGAAATTCGAGGAGTTTCTGCGCGGCAAGCCGGCGGCGCTGCGGGAGATCGCGCAGAAGCGCAGCTTGAAGGGTGAATTTGTGGTGATGGTCGCGTCAGCCTAG
PROTEIN sequence
Length: 233
MDAAQLPPLTPGTLYLVATPIGNLEDITLRALRVLRECDVVAAEDTRRSGQLLKHFEIAKPLLSYFQFNEAKRSEEIIERLRRGEKIALVTDAGSPGISDPGERVVKAAIAAGFRVEAVAGPCALVAALTASGLPADEFHFVGFLPHKSGQRRNQLASLKTVPGTLVFYESPYRIEKLLGELNEVFPERDVVLARELTKKFEEFLRGKPAALREIAQKRSLKGEFVVMVASA*