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berkeley_reactor_200306_planktonic_scaffold_58787_115

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(141676..143727)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, plug n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AR2_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 672.0
  • Bit_score: 571
  • Evalue 9.40e-160
TonB-dependent receptor, plug similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 672.0
  • Bit_score: 571
  • Evalue 2.70e-160
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABE44380.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 672.0
  • Bit_score: 571
  • Evalue 1.30e-159

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Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2052
ATGATTGGATACCGGCCATCGCTGCGCCCCAAATGTAGTCCCGCCCTCCGGCGCACCGGCTGGTTCGTGCGCTGGTTGATGGCTGGCGCACTGTTCGTTCCGAATTGCTGTATTTTCGCACAACTTCCAACCGGGGCCACCAATTCGCCGGCGGCCGAGGTATATAAATTAAAGCAGATGAGCCTGGAAGAATTGATGAATCTGGACGTCACCTCCGTGACCAAACAGCCGGTGCCCTACGGACAGGCTCCGGCGGCCATCCAGGTCATCACCAGCGACGAAATCCGGCGCTCCGGCGCATCGAGCATTCCCGAAGCGTTGCGGCTGGCCAGCAGCCTGGACATTGCCCAGAAAAACTCCCACGACTGGGCCATCAGCGCCCGCGGTTTCAACACCTCGCTCGCCAACAAGATGCTGGTTTTGATGGATGGGCGCAGTGTTTACACGCCGCTCTACTCCGGCGTCTTCTGGGATGTGCAGGATTATCTGCTTCAAGACATTGATCGGATCGAGGTGATCAGCGGTCCCGGCGGCACGCTCTGGGGTGCCAACTCCGTCAATGGCGTCATCAATATCACCACCAAAAGCGCGCAAGGCACCCAGGGACTCTACACCGAGGCGGGCGGCGGCAATTGGCTGGAGGATTTTGCCGGCGCGCGCTACGGCGGAATCCTGGCTTCCAATGTTTATTACCGGGTTTACGGAAAATATTTCGACCGCGGCGACGAAAAACTGTCAAACGGCGACAACGCCACGGATTCCTGGCGCATGGGCCAGACCGGATTCCGGGTGGATGCGGAACCGGAATTGCAAAATACCTACACCCTGCAAGGCGATGGTTATGTGGGCAGCGAAAACCTCGAGACCGGCGGCGCCGCCCAAACTGCGGGCGGCAACCTTCTCGGACGCTGGACGCACACCTTTTCGGGAGATTCCGACATGCAATTGCAGGTGTATTATGACCGCACGCATCTGCGCAACGACGCGCCCGCGCTGGTCACACCCGGTGGCACCGTGCTGGCTCCCTCCGGGGTTTTTGCCGACGACCTGGATACTTACGACATTGATTTTCAACATCACTTCCATTTGGCCGGCCGCAACAACATCGTGTGGGGACTCGGTTATCGTTTTACCCACGAAGTGGAGCAGAACGCGCCGTCGCTGGCCTTTTTACCGGCGGTCCAGGACCTGAATCTTTACAGCGGATTTTTACAAGACGAAATCCGGCTCCGGCCGGACTGGTATTTCACGCTGGGGAGCAAACTGGAACACAACGATTACACGGGCTTTGAATGGGAGCCCAGCGCGCGCCTGCGCTGGGACGTGACGGCCAGCCAGATGCTCTGGGCCGCCGTTTCGCGCGCGGTCCGGACGCCTTCCCGCATTGACCGCGCCCTGTCGGAAGGCGAGCCGCCTTATTTTGTTCTGCTGGCGGGTAATCCCGATTTCGAATCCGAGAAGCTGATTGCCTACGAACTGGGTTATCGCGCGCAGCTTGGCCCGAAGTTGTCCACCTCCATTTCCACTTTTTACAACCAGTATGACGACATTCGCAGCACCTCGGTCAACCCCGCCACCATTTTCCCCCTTTTCTTTCAAAACAATGTCCAGGGCGAAACCTACGGGATTGAATTCAGCGCCGCCTACCAGTTGTTCGCCTGGTGGCGGTTGCGCGGCGGTTACGATTATTTGCACGAGCATTTGTATGTCACACCTGGACAGACTGATTTCAACAACGCGCTGAATGAAACGGCGGATCCGAAGCATCAATTTTCGTTGCGGTCCTCGATGGATCTGCTTAAAAACACGGAACTGGACGCCGGGTTGCGCTGGGTGGACACGCTGCATAACAACAACGGCCCCAATGTCGGCACGGTGCCGAGCTATTTCGAGCTGGATGTCAAGCTGGCCTGGCATCCCACCAAACGGCTCGAACTCTCGGTCGCGGGACAGAATCTGCTGCACGACCAGCATCCCGAATATGGTTATCCCGATCCGGCGCGGGTGGAAATAAAACGCAGCATTTACGGAAAGGTGGCATGGCAATTCTGA
PROTEIN sequence
Length: 684
MIGYRPSLRPKCSPALRRTGWFVRWLMAGALFVPNCCIFAQLPTGATNSPAAEVYKLKQMSLEELMNLDVTSVTKQPVPYGQAPAAIQVITSDEIRRSGASSIPEALRLASSLDIAQKNSHDWAISARGFNTSLANKMLVLMDGRSVYTPLYSGVFWDVQDYLLQDIDRIEVISGPGGTLWGANSVNGVINITTKSAQGTQGLYTEAGGGNWLEDFAGARYGGILASNVYYRVYGKYFDRGDEKLSNGDNATDSWRMGQTGFRVDAEPELQNTYTLQGDGYVGSENLETGGAAQTAGGNLLGRWTHTFSGDSDMQLQVYYDRTHLRNDAPALVTPGGTVLAPSGVFADDLDTYDIDFQHHFHLAGRNNIVWGLGYRFTHEVEQNAPSLAFLPAVQDLNLYSGFLQDEIRLRPDWYFTLGSKLEHNDYTGFEWEPSARLRWDVTASQMLWAAVSRAVRTPSRIDRALSEGEPPYFVLLAGNPDFESEKLIAYELGYRAQLGPKLSTSISTFYNQYDDIRSTSVNPATIFPLFFQNNVQGETYGIEFSAAYQLFAWWRLRGGYDYLHEHLYVTPGQTDFNNALNETADPKHQFSLRSSMDLLKNTELDAGLRWVDTLHNNNGPNVGTVPSYFELDVKLAWHPTKRLELSVAGQNLLHDQHPEYGYPDPARVEIKRSIYGKVAWQF*