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berkeley_reactor_200306_planktonic_scaffold_58787_119

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 152590..153666

Top 3 Functional Annotations

Value Algorithm Source
Shikimate/quinate 5-dehydrogenase id=3744808 bin=GWF2_Lentisphaerae_57_35 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 326.0
  • Bit_score: 331
  • Evalue 8.60e-88
glutamyl-tRNA reductase similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 337.0
  • Bit_score: 277
  • Evalue 4.20e-72
Tax=GWF2_Lentisphaerae_57_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 326.0
  • Bit_score: 331
  • Evalue 1.20e-87

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Taxonomy

GWF2_Lentisphaerae_57_35_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1077
ATGAAAATTTTCGTAGCAGGATTGAGTTACAAGACCACCCCGGTGGAAGTGCGCGAGCAACTTGCGGTTCATCGTTCCCGCCTGCAATGCAGCGGCTGCCGCCTCAAATTGCGCGGCGGCCTGGCGGAGGTGGTGCTGCTTTCCACGTGCAACCGGGTGGAAATCTACGGCGTGTCTCCCTGGATTCACGGACGCGTGCAGTCGTTGTTCCAGGAGCTGACCAGCAGCGATTTTGATTTCACGCCGCATCTTTACGTCAAGGAAGGCGCGGAAGCCGCCAAACATCTGTTTGCCGTGGCCAGCGGTTTGGATTCGCTCGTGATCGGCGAAACCGAGATCACCGGGCAGGTCAAGAACGCGTATCAAGCCGCGAAAGACGCCGGTCTCGTGGGCCGGAAAATGAACCGCCTGTTTCAAAGCGCCTTTTCCGTGGTGAAGGCGATCCGCACCAACACCGGCATCGGGCGCGGCGCCACTTCGGTCGGGAGCGTGGCGGTGGAACTGGCGGAAAAGGTTTTCGATCGCGATCTCAGTTCCAAAACCGTGATGATTTTGGGCGCGGGCAAAATGGGGGAGGCCTGCGTGAAACACCTGGCCAAACGCGGCGCCAAAACCGTGCTGGTGGCCAACCGCTCCGTGGAACGCGCCGAACGGCTGGCGACGGAATTTGGCGGGCGCGCGGTGCGCCTCGAGGATTCCGCGGCGGCGCTGACCGCGGCGGACATTCTGGTCAGTTCCACCGGCAGCCCGGACATCGTGCTCAAGCGCGACGACGTGGCGAAAATTTTGCCGGCGCGGCGCAACCGCCCGCTGGTGCTCGTGGATATTGCGGTGCCGCGCGACATTGATCCCGCCGTTGCCGGACTGGCGAACGTTTTCCTTTACGACATTGACGACCTGGAGGCGGTGGTGCGGGAAAACACCAAGCACCGCGAGCAGGAACTGGCCTTGTGCCACCGCATCATCGCCGAACAGGCGGCGGTGGTGATGGAACGCTTTAACTCACCCTTCGCGCCACGTCCCCGTGAAGCGGTGTCAACCGCGCCCGCCTGGGCGCTGGGCGGGGCGGCGGCATGA
PROTEIN sequence
Length: 359
MKIFVAGLSYKTTPVEVREQLAVHRSRLQCSGCRLKLRGGLAEVVLLSTCNRVEIYGVSPWIHGRVQSLFQELTSSDFDFTPHLYVKEGAEAAKHLFAVASGLDSLVIGETEITGQVKNAYQAAKDAGLVGRKMNRLFQSAFSVVKAIRTNTGIGRGATSVGSVAVELAEKVFDRDLSSKTVMILGAGKMGEACVKHLAKRGAKTVLVANRSVERAERLATEFGGRAVRLEDSAAALTAADILVSSTGSPDIVLKRDDVAKILPARRNRPLVLVDIAVPRDIDPAVAGLANVFLYDIDDLEAVVRENTKHREQELALCHRIIAEQAAVVMERFNSPFAPRPREAVSTAPAWALGGAAA*