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berkeley_reactor_200306_planktonic_scaffold_58787_143

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(189150..189659)

Top 3 Functional Annotations

Value Algorithm Source
UvrB/UvrC protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRW5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 249
  • Evalue 1.60e-63
UvrB/UvrC protein {ECO:0000313|EMBL:EEF57424.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 249
  • Evalue 2.20e-63
mcsA; Modulator of heat shock repressor CtsR, McsA similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 161.0
  • Bit_score: 174
  • Evalue 1.80e-41

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 510
ATGCAATGCTGCATTTGTAAGGAAAAACCGGCGACCGTGCATCTCACGCAGATCGTGGGCGACAAGATGCAGAAGCTGGATTTGTGCGAAGATTGCGCCAAGGCCAAGGGCATCAACGACCCGACCAGTTTCGCGATGGCAGACCTGATGCTGGGGCTGGGCGCCTCGCAGGAACTGGACACATCCGCCATCGGCTCGGAATTGAAGTGTCCGCGCTGCGGTTTTTCGCAGGCGGATTTCAAGAAATCCGGCCGGCTCGGCTGCCCGCAATGTTACGAAACCTTTGCCGAAGGATTGGCCGGGTTGTTCAAGAGCATGCATCGCGGCACCCGGCACGTGGGCAAGGCGCCCGAAGCCCTGCGCAAGGCCCGGGAAACCGGCGACCGGCTCAAGCTCCTGCAAAAGAAACTCAACAAGGCCATCGAGACGGAGGATTTCGAGACCGCCGCGACCTTGCGCGATGAAATCAGGGCCATGAGCAGTCCGTCCTCCGCCAAGGCTTCCCGATGA
PROTEIN sequence
Length: 170
MQCCICKEKPATVHLTQIVGDKMQKLDLCEDCAKAKGINDPTSFAMADLMLGLGASQELDTSAIGSELKCPRCGFSQADFKKSGRLGCPQCYETFAEGLAGLFKSMHRGTRHVGKAPEALRKARETGDRLKLLQKKLNKAIETEDFETAATLRDEIRAMSSPSSAKASR*