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berkeley_reactor_200306_planktonic_scaffold_58787_149

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(198809..202207)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
NHL repeat containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBK1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 808.0
  • Bit_score: 532
  • Evalue 6.20e-148
NHL repeat containing protein {ECO:0000313|EMBL:EEF62886.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 808.0
  • Bit_score: 532
  • Evalue 8.60e-148
NHL repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 719.0
  • Bit_score: 528
  • Evalue 4.30e-147

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3399
ATGAAAACAAATTCGCGGACGTTTACCGGCCTTTGGATGCTGCCGGGCCTGCTTTGCGCCTCCCCGTGCATTGACGCTCAAAGCATTTACACGCCGTATGCCTTCACCAATTTCGCGGGCCAGCCGGGCGGGCCGGGGTCGGCCGACAGTTCCGGCACGGGGGCGCGCTTTCGATCGCCGACCGCCACGGCGGTGGACGCGGCCGGGGATGTGTATGTGGCGGATTCCTTGAATTTTACCATCCGCAAAATCACTCCCGCCGGCGTGGTGACCACGATTGCCGGCACGCCACTGCAATACGGCAGCGCGGATGGCGTGGGCGGTGGCGCCCGGTTCGGCAGTGTTTATGGCGGACCCACTGGGATCGCGGTGGACGGCGCGACGAATCTTTACGTGGCCGACACGGGCAACTACACGATTCGAAAGCTGGTTTACAACGGAACGAACTGGGTGGTTTCGACGCTCGCCGGGAAGGCGGGATTCAGCGGCGCGGTGGACGATACCAACAGCGCCGCGCGTTTCGCCGGTCCGTCCGGCCTGGCCACCGACAGCGCGGGCAATGTTTACGTCGCCGACGGTGACGCGATTCGCCGGGTCACCCCGGCCGGCGCGGTTACGACCCTGGTGGGCAGCGCGACCGTTTACGGCACGACGGACGGCACGAATGACGCGGCGCGATTCGGCTCGTTTTCCGGCGGACCCAAGGGGGTGGCGGTGGATGCCGGGACCAACATTTACGTGGCGGACACTTACAATTCCTCGATCCGGCGCGTCTCACCCGCCGGCACCAACTGGGTGGTCACCACCTACGCGGGCGTGTCGGGATTCCTGGGCTACGGATTCAACGATGGCACCAATGACACGGCGCAGTTCGCCAATCCGTGGGGCATTGCCGTGGACCATGCCGGGCGTGTTTATGTGTCCGAAGCCCCCGCGCAAACCATCCGCAAAATTGTCCTGAACGGAACGAATCGCGTCGTCACGACGTTCGCGGGCGCGGCCGCCGTGTTTGGCAGCGCCGACGGCACGGGCGGCGCGGCGCGGTTCCAGACGCCGGAGGGCCTGTCCGTAGACGGCGCGGGGAATTTGTTCGTGGCGGAGTTTGGCAATGACACCGTTCGCCAGATCACGCCCGCCGCCGTGGTGACGACGTTTGCGGGGCAGGCTGGCGGACCGGGCGTGGCGGACGGCACCGGCAGCGCGGCGCAGTTCTATATCCCGCATAGTGCGGCGGTGGACGGCGCGGGCAATGTTTACGTGGGAGATTCGTTCAACCACACGGTTCGAAAGATTACTCCGGAGGGCGTGGTCACCACCATTGCCGGCAGCCCGGGACGAAAGGGCTATGTGGATGGCGTGGGCACTTACCAGGCGGCGCAATTTAATTCCCCCATCGGTATCGGCATGGACAAGAATGGCGACTGCTTCCTCGCGGACAACGGGAATCAAACCATTCGGAAAATCACTCCCGCCGGCGTCGTGACGACCGTGGCGGGGCAGGCCGGCATCAAAGGCAACACCGATGCCAACGGCACGAACGCCACCTTCAACAGCCCCTACGACACGGCGGTGGACAGCCACGGCAACCTCTTTGTTTCCGACTTGGTGAACCGCTGCATCCGAAAAATCACCCCGGGCGGGGATGTTACCTTGTTCGCCGGGAGTCCCACCAAGGTGCAGGGCACGAATGACGGGGTCGGGACGGCGGCCAAGTTTCAGGCGCCGGAGGGACTGGCCATTGATTCAGCGGACAACCTGTATGTGGCCGATCAGGGTGCCAGCACCATTCGCAAGATTGCCCCGGATGCCACCGTGACCACGCTGGCGGGCTTGGGCAAGGTCAGCGGCACCAACGACGGTGCCGGCGTGCTCGCGCGTTTCAACAGTCCGGAAGACGTGGCGGTGGACTCGGACGGCAACGTCTATGTGGCCGACTCGGGAAATGACACCATCCGCCGGATCACGCCCGACGGCACGGTGACGACCCTGGCCGGAAATCCCAACCAGAGCGGCACCACGGACGGCACGAACAGCCAGGCGCTGTTTAGCGACACGCGCGGAATCGCCGTGGACAGCGCCCACAACCTTTACGTGGCGGATGCCGTCAACAACTGTCGCGTGCGCAAAATCACGCACCTCGGCCCGGATTGGGTGGTCACGACGCTGGCTGGCGGCGGCGCTCCCTTCGGCGCCGAGTATAGCGTGGATGCCCCCGGCACCAACGCCGTCTTCAAAAACATCTACGGGCTGACGGCGGACAGTTCGGGCAATGTCTTCGCCGTGGACCGCGGCAATGACGATATTCGAAAAGTGACGCCGGACGGGGGCGTGACCACCTTTGCCGGCCTCGCCCGGCAGACCGGCAGCAACGACGGTTCGGGCGGCGGAGCGCAGTTCGACATTCCGGAACAAGTGGCCGTGGACAACGCCGGCAACATTTACGTGGTCGAGTTCGGGGACAACACCGTCCGCAAAATTTCTCCGAACGGCGCCAACTGGATCGTCACCACCATTGCCGGCTGCCCGTATTGCCCGGCGGGAACCAACGATGGTTCCGGGCTGGCGGCCCGTTTCAACGGCCCGTTCGGCCTGACCGTGGACCATGCCGGCAATGTGTATGTGGCGGACACCGGCAACCGCACGATCCGCAAAATCGCGCCGTCGGGAACCAACTGGGAGGTGACCACTTTCGCCGGCACCCCGGCGGCGGGACCGATCGGTGACGGCACCGGCACCAATGCGCATTTTGCCAGTCCGCTCGGACTGGCCGCGGACGTCACCGGCCTCTACGTGGCCGACAGCAGCACCATTCGCAAAATCACGTTCGCCGGCGACGTCACCACGCTGGCGGGTTGCATTATTTGCGGCCCCGGTTCCGCCGATGGCCTCGGCACCAATGCGCTGTTCTGGTCGGCCCGGGGCGTGGCCGTGGACCGGGACGGCAATCTTTACGTGGCTGACCAGGCCAACGACCTCGTCCGCAAACTCACCTTCAACGGATCGGACTGGATGGTGACGACATTGGGCGGCGTCGTCGGCCAGGCGACCGGCAAGGACGGCGTCGGTGCCGACGCGCGGTTCAATCAACCCACCGGCGTGGCGGTGGACAACGCCGGGAATGTTTACGTTGTCAATTCCGGCGAAAACAACATCGAGAAGGGCGTGGCCACGAACAGCGTCACCACGCCGCTCCAGTTTGCCTCCGGCAACGGCAGCCTGACGTTTTCAAACGGTTTCTTTCACCTGAACGTCAGCGGCCCGGCGGGCGCCAGCGTCATCATCGAAGCCTCAACCAACCTGCAAAGCTGGACGCCGATTCAGACCAATCCGCTGCCGCTGATGCTGGCGGTGCCGGGCGACTTTCCCAACCGATTTTTCCGGGCGCGACTGGCGCCCTGA
PROTEIN sequence
Length: 1133
MKTNSRTFTGLWMLPGLLCASPCIDAQSIYTPYAFTNFAGQPGGPGSADSSGTGARFRSPTATAVDAAGDVYVADSLNFTIRKITPAGVVTTIAGTPLQYGSADGVGGGARFGSVYGGPTGIAVDGATNLYVADTGNYTIRKLVYNGTNWVVSTLAGKAGFSGAVDDTNSAARFAGPSGLATDSAGNVYVADGDAIRRVTPAGAVTTLVGSATVYGTTDGTNDAARFGSFSGGPKGVAVDAGTNIYVADTYNSSIRRVSPAGTNWVVTTYAGVSGFLGYGFNDGTNDTAQFANPWGIAVDHAGRVYVSEAPAQTIRKIVLNGTNRVVTTFAGAAAVFGSADGTGGAARFQTPEGLSVDGAGNLFVAEFGNDTVRQITPAAVVTTFAGQAGGPGVADGTGSAAQFYIPHSAAVDGAGNVYVGDSFNHTVRKITPEGVVTTIAGSPGRKGYVDGVGTYQAAQFNSPIGIGMDKNGDCFLADNGNQTIRKITPAGVVTTVAGQAGIKGNTDANGTNATFNSPYDTAVDSHGNLFVSDLVNRCIRKITPGGDVTLFAGSPTKVQGTNDGVGTAAKFQAPEGLAIDSADNLYVADQGASTIRKIAPDATVTTLAGLGKVSGTNDGAGVLARFNSPEDVAVDSDGNVYVADSGNDTIRRITPDGTVTTLAGNPNQSGTTDGTNSQALFSDTRGIAVDSAHNLYVADAVNNCRVRKITHLGPDWVVTTLAGGGAPFGAEYSVDAPGTNAVFKNIYGLTADSSGNVFAVDRGNDDIRKVTPDGGVTTFAGLARQTGSNDGSGGGAQFDIPEQVAVDNAGNIYVVEFGDNTVRKISPNGANWIVTTIAGCPYCPAGTNDGSGLAARFNGPFGLTVDHAGNVYVADTGNRTIRKIAPSGTNWEVTTFAGTPAAGPIGDGTGTNAHFASPLGLAADVTGLYVADSSTIRKITFAGDVTTLAGCIICGPGSADGLGTNALFWSARGVAVDRDGNLYVADQANDLVRKLTFNGSDWMVTTLGGVVGQATGKDGVGADARFNQPTGVAVDNAGNVYVVNSGENNIEKGVATNSVTTPLQFASGNGSLTFSNGFFHLNVSGPAGASVIIEASTNLQSWTPIQTNPLPLMLAVPGDFPNRFFRARLAP*