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berkeley_reactor_200306_planktonic_scaffold_58787_150

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 202463..203131

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 218.0
  • Bit_score: 187
  • Evalue 1.30e-44
Pseudouridine synthase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0R1_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 218.0
  • Bit_score: 187
  • Evalue 9.50e-45
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 218.0
  • Bit_score: 187
  • Evalue 2.70e-45

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Taxonomy

Chroococcidiopsis thermalis → Chroococcidiopsis → Pleurocapsales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCTCATTGCCTTCCACAAGCCCTATGGCGTGCTGTCGCAATTCACCGGTGACGGCTCGCCGAACCGGACGCTCGCGGAATTTGCTTTTCCCGGGCAGGTTTATCCCATCGGCAGGCTGGATGCCGACTCCGAAGGATTGCTGCTGTTGAGCGATGAAGCGTCCTGGAACGAAAAACTTCTGCACCCGCGTCATGCGCATGAGCGTGAGTATTGGGCGCAGGTGGAACGCATCCCCACCCGCGAAGCTTTGGACACGTTGCAACGCGGTGTGATGATTCAAGGCCGCAAAACCTTGCCCTGCCGCGCCTGGCGGCTGGAGCCACAACCCCAGGTTGCTCCTACTGTTGAAAGTTCCAACCTTCTTGAACAAGAAGCTGGCGGCCGGCAAGGAGCGGCTCGCGGGGACGCTCGCCCCACCATCATTCCGGCGCGCCATCCGCCCATCCGGTTCCGCAAAAGCGTGCCCGACTGCTGGATCGGACTGGAACTGGTCGAAGGCAAAAACCGTCAGGTGCGGCGCATGACGGCGGCGATCGGGTATCCGACGTTGCGATTATTGCGGGTGCGAATCGGCAATTTCTGGCTTGGCCATCTGCCTTCCGGCCAGTGGCGGATTCCAAGCACCCAAGAGCGGCAATTGATTTTGCAAAGCCCCGCCGCCGCCTAA
PROTEIN sequence
Length: 223
MLIAFHKPYGVLSQFTGDGSPNRTLAEFAFPGQVYPIGRLDADSEGLLLLSDEASWNEKLLHPRHAHEREYWAQVERIPTREALDTLQRGVMIQGRKTLPCRAWRLEPQPQVAPTVESSNLLEQEAGGRQGAARGDARPTIIPARHPPIRFRKSVPDCWIGLELVEGKNRQVRRMTAAIGYPTLRLLRVRIGNFWLGHLPSGQWRIPSTQERQLILQSPAAA*