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berkeley_reactor_200306_planktonic_scaffold_66144_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20111..20797

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSQ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 224.0
  • Bit_score: 285
  • Evalue 3.40e-74
chemotaxis protein CheY similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 231.0
  • Bit_score: 256
  • Evalue 4.90e-66
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 224.0
  • Bit_score: 288
  • Evalue 4.40e-75

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Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 687
ATGAATACCAGACCGCTGATTTTGATCGTGGACGACGAACCGCAGATCCGGCGGTTGCTGACCGTGATGCTGGAGGCGAACGGTTATCGCGTGCTGTCCGCCGGCAGCGGGCAGGAAGGCCTGGTGCTGGCGGCGCAGCATCAGCCGGCGTTGATGATCCTGGACCTGGGCCTGCCGGATTTGCCGGGGCAGGAGGTTCTGCGACGGTTGCGGGAATGGACGCAATCGCCGGTGATCGTGCTGTCGGTGCGGGACGATGAAAAGGGCAAGGTCGCCGCGCTCGACGGCGGCGCGGATGATTACGTGACCAAGCCGTTCAACAGCGACGAATTGCTCGCCCGCGTGCGGGTGGCGCTGCGTCACGCCACGAACCGCGAAGAGACGGCGCTGGTGCAGGCGAAAAATCTGGTCATGGATCTGGCGTCGCGCCGGGTGACGGTCGCGGGCGTGGAGGTGAAACTTTCCAAGACGGAATATGAACTGCTCCGCCTGCTGGCACGTCACGCCGGGAAGGTCTTGACGCACCGGCAGATTCTGCGCGAGGTCTGGGGCCCGGGCCATGAAAACGACACGCATTACCTGCGCGTTTACATCGCCCACCTGCGCGAGAAAATCGAGAGCCATCCCGAGTCGCCGGAATTGATTTTGACCGAGCTGGGCGTCGGGTATCGGTTTCTGGCCCGATAG
PROTEIN sequence
Length: 229
MNTRPLILIVDDEPQIRRLLTVMLEANGYRVLSAGSGQEGLVLAAQHQPALMILDLGLPDLPGQEVLRRLREWTQSPVIVLSVRDDEKGKVAALDGGADDYVTKPFNSDELLARVRVALRHATNREETALVQAKNLVMDLASRRVTVAGVEVKLSKTEYELLRLLARHAGKVLTHRQILREVWGPGHENDTHYLRVYIAHLREKIESHPESPELILTELGVGYRFLAR*