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berkeley_reactor_200306_planktonic_scaffold_66144_24

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 29637..30269

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAT8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 210.0
  • Bit_score: 364
  • Evalue 4.10e-98
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF63123.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 210.0
  • Bit_score: 364
  • Evalue 5.80e-98
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 203.0
  • Bit_score: 191
  • Evalue 1.40e-46

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 633
ATGAAAAAGTCTGTGATCATTGTCGAGGACGACCGCGGGTTGCGCGAGCAGCTCGTGCAAATCCTCGAATCCGCGCCGGATGTAAAATGCCTGGGTGCCCACGGTTCCGCGGAGGAAGCCCTGCCGCAAATCTTCGCAAAAAATCCCGACGTGGTGCTGATGGACATCAAGCTGCCCGGCATGTCGGGAATACAGTGCGTGGCGGAAATCAAGAAAACGGCGCCCACGATGCAGGTCATCATGGTGACCGTCTATGAAGACAGCGAACGGATTTTTCGCGCGCTCAAATCGGGCGCCAACGGCTATCTCGTCAAGTCCAGTCCGCCGGAGCAATTGCTCGCGGCCATTCGCGATGTTTCCACCGGTGGCGCGCCGATGTCCAGCCACATCGCCAGCAAGGTGGTCCGGCATTTTCACCTGATCGGCACGTCGCCGACCGAATCGGAAAACCTTTCGCCGCGCGAACGGGAGGTGCTTGATTTGCTGGCGTCGGGTTTTATCTACAAGGAAATCGGCGACAAACTGAACATCGGCACGGAGACGGTGCGAACTTACGTCAAAAACATCTGCCAGAAAATGCACGTGCGGAGCCGCTTGGAAGCCGTCGCCAAACACAAATCGGAAGCTTACTGA
PROTEIN sequence
Length: 211
MKKSVIIVEDDRGLREQLVQILESAPDVKCLGAHGSAEEALPQIFAKNPDVVLMDIKLPGMSGIQCVAEIKKTAPTMQVIMVTVYEDSERIFRALKSGANGYLVKSSPPEQLLAAIRDVSTGGAPMSSHIASKVVRHFHLIGTSPTESENLSPREREVLDLLASGFIYKEIGDKLNIGTETVRTYVKNICQKMHVRSRLEAVAKHKSEAY*