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berkeley_reactor_200306_planktonic_scaffold_64763_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 30716..32437

Top 3 Functional Annotations

Value Algorithm Source
Xanthan lyase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG87_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 557.0
  • Bit_score: 406
  • Evalue 3.40e-110
Xanthan lyase {ECO:0000313|EMBL:EEF61249.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 557.0
  • Bit_score: 406
  • Evalue 4.70e-110
xanthan lyase similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 554.0
  • Bit_score: 373
  • Evalue 8.90e-101

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1722
ATGCGCTCGGTTTCACGAAGACGTTTCCTAAAGCAAACTTCGACAATCTCTCTTGGGCTGTTGGCCACCGGCCTGGCAAGGGCGGCGGGCCCGGTGAAAGAAAAGTTTGACGTTTGTATCTATGGCGGCACTTCTGGAGGGGTGATCGCCGCAGCCACATTGGCAAGACAAGGAAGATCCGTTTTGCTGGTTGAACCCACCCGTCACGTGGGTGGAATGACTGCCGGAGGTCTCGGCTGGGTGGATTGTGGTAATGCGGAAACCATCGGCGGACTTACGCGGCAGTTCTTTGGCGACATCGCCAACTATTATCGCGGATTAAAGGTGCCGACCAACGGCTGGAGCGTGGAACCCCACGTGGCCGAGCTGTTTTTTGAAAAGTTGCTGGACGATTCTTTGATTACAGTCTTGCGTGAGGCCAGACTGTCCGCCCTAAAAAAAAACGGGGGGCGCATTGAATCCATTACGCTGGACAAAGCGCCCGTGCAACAGCATGGGGCGCCCGCTTCCACACCGCTCGAAGAGAGGTTTTACGTCGCTAAGGCGGCAATCTACCTTGACTGCAGTTATGAAGGCGACCTCATGGCCCGGGCTGGCGTGTGTTATCGGATGGGACGGGAAGGAGAAAATGAATATCGCGAAAGCCTGGCCGGTTTCAGGATCAACTCGCTGTCGGCAGACACAATAAAACCAGGCCAACCGGACAATGCCCGTCTCAGCATTGATCCCTATGTTCGTATGGGTGATTCTTCCAGTGGTCTGATCCGTTTTGTTTCGGATCAAGCCATGGTTCCGACCGGCTCCCGGCAGGACAGCGTGCAAGCCTACACATTTCGACTATGTCTATCAAAAGAAAACTGTAAGCCGATTGATCCGCCACCAAATTTTGAGCCGAATGATTATGAAATAGTCCGCAGGTATGTGGATGCACTGAAAACGGTTGGCGCGCCGCTTTGGCGCGGAGATTTATACTACAACTTCGGGTTTGAGAAGCGATATGGATCAAACTTGCCGCGCCTGCTTAAAATTACCCGCTTGATGCGCGGCAAAACCGATGTCAACAACAGTGGGCCGGTTTCCATTGACTACGTAAATGGTGGTTCCACCGGATATGCTTGTGGAGATTGGCCCACGCGCGCAAAAATATGGCGAGCCCATGAGGATTATATCCGGGGATTTTTATATTTTCTACGCACAGATGAAAAGCTTCCGGGCTGGCTGAGGGCTGAGACCAGTCTTTGGGGGTTGTCACAAGATGAGTTCATGGACACGAACGGTTGGCCGCACCAGCTATATGTTCGCGAGGCCCGGCGCATGCGGGCCAGAGTGGTGGTGAACCAATCGTATTGTGAGCGCGGAGGTGACTCAGAAACTTCCATTGGAAAGGGAAGTTATGCCTTGGACTCGCACCAGTGCCAAAGGCTCCTGCAGGGCGGGATCGTCGTCGGCGAAGGAGGTTTTTTTCAAGGTATCAAAACCTATTCCATACCGTATGGCACAATCTGCCCTGACGAGGGTGACTGTGAGAATCTGCTGGTAACGTGTTGCCTTTCCAGCACACACGTTGCCTATGCCTCTCTGCGCATGGAACCGGTTTTTATGATATTGAGTGAATCAGCGGCCGTGGCAGTGGACATGGCTCTTGTCAAAGGCTGCTCTGTTCAACAGGTCCCAATCGATCAACTCAAAAAGCAATTGACCGAACAAGGACAGGTAACTTAA
PROTEIN sequence
Length: 574
MRSVSRRRFLKQTSTISLGLLATGLARAAGPVKEKFDVCIYGGTSGGVIAAATLARQGRSVLLVEPTRHVGGMTAGGLGWVDCGNAETIGGLTRQFFGDIANYYRGLKVPTNGWSVEPHVAELFFEKLLDDSLITVLREARLSALKKNGGRIESITLDKAPVQQHGAPASTPLEERFYVAKAAIYLDCSYEGDLMARAGVCYRMGREGENEYRESLAGFRINSLSADTIKPGQPDNARLSIDPYVRMGDSSSGLIRFVSDQAMVPTGSRQDSVQAYTFRLCLSKENCKPIDPPPNFEPNDYEIVRRYVDALKTVGAPLWRGDLYYNFGFEKRYGSNLPRLLKITRLMRGKTDVNNSGPVSIDYVNGGSTGYACGDWPTRAKIWRAHEDYIRGFLYFLRTDEKLPGWLRAETSLWGLSQDEFMDTNGWPHQLYVREARRMRARVVVNQSYCERGGDSETSIGKGSYALDSHQCQRLLQGGIVVGEGGFFQGIKTYSIPYGTICPDEGDCENLLVTCCLSSTHVAYASLRMEPVFMILSESAAVAVDMALVKGCSVQQVPIDQLKKQLTEQGQVT*