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berkeley_reactor_200306_planktonic_scaffold_64763_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 38485..40185

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRB7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 338.0
  • Bit_score: 245
  • Evalue 9.80e-62
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF57604.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 338.0
  • Bit_score: 245
  • Evalue 1.40e-61
nrfG; TPR repeats containing protein similarity KEGG
DB: KEGG
  • Identity: 25.0
  • Coverage: 568.0
  • Bit_score: 138
  • Evalue 3.70e-30

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1701
ATGAAATTCATTCTGGTCGCGGCGTTGTTGTTCATGGGGCTGTTGTGTGGCGCCCGCGCGCAACAAGTGGCGGACGATCAATACATTGGCATTTACGGACTGATCCAGCAGGCGGATCATTTGACGGAGACGGGTGATCCGGGCGAGGCGCTGGCGGCATACGTGGACGCCGAAAAGGCGCTTCAACAATTTCAGCGAATGTATCCGGACTGGAATCCTGGCATCGTGAAATTTCGCCTGGGTCAAATCGGTAAAAAAATCGTCGAGCTCAAGCAGGAAACTTCGTCGTCAACCACGACATCCGCCGCAACCCAGATGCCGGCGCCCGCCCGGAACGCCACTGCGGAGAACGCCAGCGCCGCGCAATCCACCCTGACGAAGGACGGCGCTGAATTGCAGGATTTGCGGGCGCAATTGCAGACGGAGCGCGCGGCCAATCAGAAATTGCAGGCCCGCCTGAAGGAAGCGCTTTCGGTTCAGCCGGCGGCGGTGGACCCGCGTGAACTCGCCAAGGCCCGGGAGAAAATTCTCTGGTTGATGAAGGAAAACGATTTGCTCAAGGCCAGCCACATCACGGCGGGTTCCGCCGGCGCGGTGACCCGCTATGTCACCAATGTGGTCACCGTGGTGGTGACGAATACCCAATCCATTGTCGTCACCAATTTTGCGGAGGCGTTTGCGGCCAACCGCGGGCCGACGGTGGTCACGAATTTTGTCCGTGTGCGGGTGCCGGACACCAATGCGCTCGCCAGCGCGCAGCTTGAACGCGCGGCTGCGGTCAGGAATTTCAATGAGGAACATGTGCGTGCCGGTGAACTCGAGCAGGAATTAAAGAAGCTGGCGCTGGAGGAAAGCGCCGCGGTCACCGCCAGCAGCGCCGGCAACGCGGAGCTGGCGGCCCTGCGGCGGGAAAACGCCGCCTTGAAACAGGAAATTGCCGCGCTACGTTCCGGTTCATCCGCGGAGGCGCTGAACGAAGAAATCAAAACACTTCGCGCCCGGCTGGCGGTGGCGGAGGCGCGGCCGGTTCCGTTCACGGCCGAGGAACTGGCGTTGTTCAAAAATTCCGCGCCGCAGCCGGCGGCTCCGAAACCGGGCCACGATGCCGCCGGAACAATGTCGGCGAGCACGGCGAATCTGGCCGCTTCGGCGCAGGCGCATTTCAATCATCAGGAATTTGATCAGGCGGAAGCGGACTATCAGAAGATCCTGGCGCAGGATCAAAATAACGGCATGGCCCTGGGCAATATTGCCATGATCGAACTGCAACAAGGCAAATTGGATCAGGCCCGGAAGCACCTCGACGCCGCGCTGGCGAAAAATCCGGATGATCCCTACAACCTGTCCACCTTGGGCTACCTGAAGTTCCGCCAGGGGAAATATGAGGAGGCGCTGAATGCCCTGAGCCGCGCGGCGAAGCTGGATCCGAACAATCCGGAAATTGAGAATTATCTCGGCCTGGCCCTGAGTCACGAAGGGCATCGCCAGGCGGCCGAATCGGCCTTGCGCCGCGCCATTCGCATCAATCCCGACTATGCGCCCGCGCAAAACAATCTGGCGGTGATTTACCTGAGCCAAACGCCGCCGATGCCGGAACTCGCCCGCTGGCACTACCAAAAAGCCCTCGCTGCCGGCCAGCCGCGCAATCCCGAATTGGAAAAAATGCTGGCGGAAAAAGGGGCGCCGGTGTCTCCGCAATGA
PROTEIN sequence
Length: 567
MKFILVAALLFMGLLCGARAQQVADDQYIGIYGLIQQADHLTETGDPGEALAAYVDAEKALQQFQRMYPDWNPGIVKFRLGQIGKKIVELKQETSSSTTTSAATQMPAPARNATAENASAAQSTLTKDGAELQDLRAQLQTERAANQKLQARLKEALSVQPAAVDPRELAKAREKILWLMKENDLLKASHITAGSAGAVTRYVTNVVTVVVTNTQSIVVTNFAEAFAANRGPTVVTNFVRVRVPDTNALASAQLERAAAVRNFNEEHVRAGELEQELKKLALEESAAVTASSAGNAELAALRRENAALKQEIAALRSGSSAEALNEEIKTLRARLAVAEARPVPFTAEELALFKNSAPQPAAPKPGHDAAGTMSASTANLAASAQAHFNHQEFDQAEADYQKILAQDQNNGMALGNIAMIELQQGKLDQARKHLDAALAKNPDDPYNLSTLGYLKFRQGKYEEALNALSRAAKLDPNNPEIENYLGLALSHEGHRQAAESALRRAIRINPDYAPAQNNLAVIYLSQTPPMPELARWHYQKALAAGQPRNPELEKMLAEKGAPVSPQ*