ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_64763_25

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 40822..43146

Top 3 Functional Annotations

Value Algorithm Source
FG-GAP repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRB9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 770.0
  • Bit_score: 988
  • Evalue 2.80e-285
FG-GAP repeat protein {ECO:0000313|EMBL:EEF57606.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 770.0
  • Bit_score: 988
  • Evalue 3.90e-285
FG-GAP repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 773.0
  • Bit_score: 335
  • Evalue 2.80e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2325
ATGAATCGTTTGTTGCAACAGTTTTGCGGGGCGGTCGCGACGGGGCTGGGCCTCCTCCTTTTTCCCGGCGCCGTTTCCGCCGCCACGGCCACCAACGTGTTCGGTTTCAGCGGCCCGGAAATTTTCCCCATTGACCAGCAAATCTCCCAGCTCCGGGTGGCGGACTTGAACGGCGACGGTTTGAACGACCTCATCGTGGCCAACAACCTGCGCTCCAAAATCAATCTGCTCTACAACCTCACCGGCAAAACCAACCGCGCGGATGCCACGCCGCCGCGGAAACTGGAGATCAATGAACTGCCGCCGGGTTCGCGGTTTCGCATTGATTCCGTGCCGACGGATGAGCGCATCGCCGCCTTGTATGCCGAGGACATGAACGGCGACCATCGGCCCGACCTGGTTTATTTTGGCGACGGCAAGGATTTGATCATTCGTTACAACCTTGGCACGAACGGCTGGAGCGATCCCAAACGCTGGCATCTGGATGACGGCATGTTGAGCCCGAACGCCCTGGTGATTGGCGACTTGAACGGCGATGGGCTGCCGGATGTGGTGGTGCTGGGCGACAGCGGCAAGGCCTATTTCCTCGCGCAGCAAAAAGATCACACGCTGGCGGAACCGGAAACCATCGCTTATTCCGGGACGCCGAAGGCGGTGGCCATTGCCGATGTGGATGGCGACGGGCGCAATGACCTGGTCTTCGTGGATTTCGACAGTTCCACTCCGTTCCGGCTGCGCCGGCAGAATGAAAGCGGCCAGTTGGATCCGGAAATTTATTTCAAAACGCCGCCGGTGCGCGCTTACTGGCTCGATAACCTGGCCGGCGACCGGACGAATTATCTGGTGACCATCGTGCAGGCGACCGGGCGCGCGGAGGTTTCGCAATTTGTGCGCCAGCCGGCTGAAACCCTGTCCGGCAAATTCAAGCAGGGACAGTTCCAAATTTTGCCGCTGAACAAGACCGACTCCGCGCAGCGCGGTGTTTTGTGGGCGGATGTGAATGGCGACGGGCGGGAGGATTTAATCGTGGCCGAACCGGAGAGTGGGCAGCTTTCGGTTTATCTTCAGCAACGCGACGGCACGCTGGCGGCGCCGAAAAAATTTCCCTGTCTCGCCGGCGTTTCCCAGATCGCCGTGTCGGACTGGGATAACGACGGCCAGCCGGAAATTTTCCTGTTGAGCCGGGATGAAAATTCCGTGGCGATGACGCAATTTGACAAGCAGGGCCGGCTGCCGTTTCCCACCCCGCTGCCGCTGGACGGCAAACCGCTGGCCATGGCCATCGGTTCGCTGAAGCACGGCGCGAAACCGACCTTGGCGGTGATCGTTGACAAAGGCGGCAACCGGTCGCTGGTCACGCTCACGGCGGGCGGCAAACCGGCCATCCAGAAATTAAGCGAGAATTTCAAGTCGAATCCCACCACCTTCGCCTTTCAGGATGTGAACCAGGACGGTTTGACGGATTTGGTGGTGTTGATGCCGTATGAAAAGGTCAAGGTGCTGCTGCAGACCAAGGACGGCAAATTTGACGAGCTGGATGTGGATCCGCCCGGCGGCGCGATGGAGCAACCGTGGCTCGCTTCCGCGGATGTGGATGGCGACGGCAAACCGGAACTGCTGCTGCCGCAAAAGAACTTTGTGCGGGCCGTGGTGCTGGAACCGGAAGCGAAGTTGTTCGGTTCCACCAACACCTCCAAGTGGACGTTCCGGGTGAAGGATCAGATCAACGGTTCGTCCAGCGACTCCCGCATCGTCGGCGCGGTGGCGGTTCCCAACGGCCGGTCGGCGGTGCCTTCGTTGTTCCTGCTGGATGCCGAGCACAAGCAGTTGACGCTGTGCGAACGCGATGCCGCCGGCGTCTGGCAGGTGGTGAAGAATCTCGATTTGCCGGTGACGTCCTTCGATTCGCTGCAATCGGTCCGGCTGGGCGAGGACAAGGCGGTGGCCTTCACCGGCCTGAATTCGGTGGCCTGGCTGCCGCTCGCCGGGGATGTGTGGAGCCTGGAAAAGCTGGATGATTATGACACGCCCATTCGCGACGGATTTCTCAACGACGTGATGGCGGGCGATTTGACCGGCAGCGGCCGCAAGCAGCTCGTCTTCATGGAGACCGCGCGGAATTACCTGGATTTGGTGTTGTTCAACTCCAAACGCAAACTGGTGCCGGGCAACCGCTGGCAGGTGTTCGAGCAACACACCTTCCGGGGCGCGCAAAATGCCATTCCCGAGCCGCGCGAATGCGCGGTGGCGGATGTCACCGGCGACAAGAAAAACGACCTCATTGTCCTGGTGCATGATCGGATTCTGGTTTATCCGCAGGAATAA
PROTEIN sequence
Length: 775
MNRLLQQFCGAVATGLGLLLFPGAVSAATATNVFGFSGPEIFPIDQQISQLRVADLNGDGLNDLIVANNLRSKINLLYNLTGKTNRADATPPRKLEINELPPGSRFRIDSVPTDERIAALYAEDMNGDHRPDLVYFGDGKDLIIRYNLGTNGWSDPKRWHLDDGMLSPNALVIGDLNGDGLPDVVVLGDSGKAYFLAQQKDHTLAEPETIAYSGTPKAVAIADVDGDGRNDLVFVDFDSSTPFRLRRQNESGQLDPEIYFKTPPVRAYWLDNLAGDRTNYLVTIVQATGRAEVSQFVRQPAETLSGKFKQGQFQILPLNKTDSAQRGVLWADVNGDGREDLIVAEPESGQLSVYLQQRDGTLAAPKKFPCLAGVSQIAVSDWDNDGQPEIFLLSRDENSVAMTQFDKQGRLPFPTPLPLDGKPLAMAIGSLKHGAKPTLAVIVDKGGNRSLVTLTAGGKPAIQKLSENFKSNPTTFAFQDVNQDGLTDLVVLMPYEKVKVLLQTKDGKFDELDVDPPGGAMEQPWLASADVDGDGKPELLLPQKNFVRAVVLEPEAKLFGSTNTSKWTFRVKDQINGSSSDSRIVGAVAVPNGRSAVPSLFLLDAEHKQLTLCERDAAGVWQVVKNLDLPVTSFDSLQSVRLGEDKAVAFTGLNSVAWLPLAGDVWSLEKLDDYDTPIRDGFLNDVMAGDLTGSGRKQLVFMETARNYLDLVLFNSKRKLVPGNRWQVFEQHTFRGAQNAIPEPRECAVADVTGDKKNDLIVLVHDRILVYPQE*