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berkeley_reactor_200306_planktonic_scaffold_68971_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 7334..8668

Top 3 Functional Annotations

Value Algorithm Source
Polygalacturonase id=4315862 bin=GWF2_Planctomycete_41_51 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 409.0
  • Bit_score: 332
  • Evalue 6.30e-88
glycoside hydrolase family 28 similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 403.0
  • Bit_score: 305
  • Evalue 1.80e-80
Tax=RBG_13_Planctomycetes_46_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 370.0
  • Bit_score: 481
  • Evalue 9.00e-133

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Taxonomy

RBG_13_Planctomycetes_46_10_curated → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1335
ATGGACTGGAAGCGTCGCTCGCAGACATCCCGCTGGAAAATCGCGTCCATTTTTTATGTGGCATTGGCGTGCCTCTTCATGGGCGCGCCAGCGTTGCTGGCGAAGGCGGGTTACAATGTGCGAACCCTCGGCGCCAGGGGGGATGGCGTGACGCTGGACACGGCGGCGATTCAACAGGCGCTGGACGACTGCAAGCCGGCCGGCGGAACGGTGATCTTTCCGCCAGGAACTTATCTCAGCGAGCCGCTGGTCCTTCACGCCTCGCACGTTGTGATTGAGTTGGAGCCGGGAGCCACGTTGCTGGCCTCCACGAACCAGCGGGCTTTCATGAAAAAACCCGGCGACTGGTTGCGGGCCAAAAGCAGCGGCGATTTCGTTCCCTTCATCGGCGGCGAGGATCTGGCGGACGTCACCTTCACCGGCGGCGGTGTGATTGACGGCAACGGGCGGGTGTGGTGGGGTGAAGCGGAAAAAGCGCGCCAGGAGCAGCCGGGTTACACCCTGCCCCGCCCCAATTTGATTGCCATCGAACGCACCCGCAACCTGACCCTGGCCGGCATCACGCTGCAAAACTCGCCGAAGTTCCATTTCGTGCCCACGGAATGCGAAGGCGTGCTGGTGTCCAACGTCACCGTGCTGGCGCCGGAGCGCGCGGCCAATACCGACGCGATTGATCCGAGCAATTGCCGGGACGTGCTGATCACGCACTGCGTCATTGATGTGGGCGATGACGACGTGGCGGTCAAATCGGGGAAAAAAGTTGCCGGCCGCGCATTTGGCTGCGAGAACATTACGGTGGCCGATTGCACGATCCTGCATGGCCACGGCATCAGCATCGGCAGTGAAACGGTCGGCGGCGTGCGGAACGTCACGGTCAAAAACTGCACCTTCGCCAACACGGAGAACGGCCTGCGCATCAAATCCCGGCCGGGACGCGGCGGTTTGGTGGAGCAAATTTTCTACCACGACATCACCATGTCGAACGTGAATCCCGCGATCACCCTTACCTGTGCCTACGCCAACAATTCGGCCGGCGACGCCGCTCAAGCCGCTGCGCCGGCGGATGACACCGCCAGGGAAGCCGGAAAAATTCCCGTCTATCGAAATATCCGGATCACGAATTTGACCGCCACGTGTCCGGATCAGGCGGGAATCATTTCCGGCCTGCCCGAAAGCTGCATCGCAAACGTGGTTTTGAACCATGTCAGCATTTCGGCGATGACGGGCTTGGTTGTCCGCAACACCAGGAACTTTCAGACAAACCAAGTTTCTGTGGTCGTGAAGCAAGGCCAACCGTTTGATTTGAAAAACGCGCAGGTTGAAAATTTGAACTGA
PROTEIN sequence
Length: 445
MDWKRRSQTSRWKIASIFYVALACLFMGAPALLAKAGYNVRTLGARGDGVTLDTAAIQQALDDCKPAGGTVIFPPGTYLSEPLVLHASHVVIELEPGATLLASTNQRAFMKKPGDWLRAKSSGDFVPFIGGEDLADVTFTGGGVIDGNGRVWWGEAEKARQEQPGYTLPRPNLIAIERTRNLTLAGITLQNSPKFHFVPTECEGVLVSNVTVLAPERAANTDAIDPSNCRDVLITHCVIDVGDDDVAVKSGKKVAGRAFGCENITVADCTILHGHGISIGSETVGGVRNVTVKNCTFANTENGLRIKSRPGRGGLVEQIFYHDITMSNVNPAITLTCAYANNSAGDAAQAAAPADDTAREAGKIPVYRNIRITNLTATCPDQAGIISGLPESCIANVVLNHVSISAMTGLVVRNTRNFQTNQVSVVVKQGQPFDLKNAQVENLN*