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berkeley_reactor_200306_planktonic_scaffold_78559_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 1656..2360

Top 3 Functional Annotations

Value Algorithm Source
Alanine racemase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGM8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 234.0
  • Bit_score: 293
  • Evalue 1.70e-76
Alanine racemase domain protein {ECO:0000313|EMBL:EEF61079.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 234.0
  • Bit_score: 293
  • Evalue 2.40e-76
alanine racemase similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 226.0
  • Bit_score: 230
  • Evalue 2.90e-58

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 705
ATGGACATTGCCGAAAATTTGCATTCAATTCATCAGCGCATGGCGGCGGCGTGCGCGCGGGCGGGCCGCGACAGATCGTCCGTCGCGTTGCTGGCGGTTTCCAAAACGCATCCGCCGGAAACGATCCGGGCGGCGGTGGACTGCGGACAGCTTTGGTTCGGCGAAAACAAGATTCAGGAGGCGAAGGCGAAAATTCCGTTGTGTCCCGGCAGGGCGCGCTGGCACTTCATCGGCCATCTGCAATCGAACAAGGTGCGCGACGCGGTGGAATTATTCGAGCTGATCCAGGGCGTGGACAGCTTGAACATCGCGAGGGAGATTTCCAAACGCGCTGAACAAGCCGGCAAAACCATGCCGATTCTGCTCGAAGTCAATGTCGCGGGCGAGGCCAGCAAGTTCGGTTACAAACCGGAGTTGTTGCTGTCGGAACTGGAGGAGTTGAACGCCCTGCCGCGCCTCGAAATTCACGGACTCATGGCCATCCCGCCTTTCACGCCGGTGCCGGAGAAATCGCGGCCCTATTTCCAAAAACTGCGGGAGTTGAAGCAGGACGGTGAACAGCGGCTTGGCGCCCCCCTGCCCCAGCTCAGCATGGGCATGAGCGGCGATTTCGAGGTGGCCATCGAGGAAGGTTCCACCCTGGTGCGCATCGGCACGGCGCTGTTCGGCGAACGACAAAGCCCCGTGCGCCAGCGGAGCGAATGA
PROTEIN sequence
Length: 235
MDIAENLHSIHQRMAAACARAGRDRSSVALLAVSKTHPPETIRAAVDCGQLWFGENKIQEAKAKIPLCPGRARWHFIGHLQSNKVRDAVELFELIQGVDSLNIAREISKRAEQAGKTMPILLEVNVAGEASKFGYKPELLLSELEELNALPRLEIHGLMAIPPFTPVPEKSRPYFQKLRELKQDGEQRLGAPLPQLSMGMSGDFEVAIEEGSTLVRIGTALFGERQSPVRQRSE*