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berkeley_reactor_200306_planktonic_scaffold_78559_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 4248..5693

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator id=12556353 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 470.0
  • Bit_score: 567
  • Evalue 7.30e-159
Transcriptional regulator, GntR family domain protein {ECO:0000313|EMBL:KFE66042.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 480.0
  • Bit_score: 450
  • Evalue 2.40e-123
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 483.0
  • Bit_score: 445
  • Evalue 1.20e-122

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Taxonomy

Hyalangium minutum → Hyalangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGCGCCCAGCCGCCCATTTGCAACGGGAGCCGGTTTACCTGAAGCTCGCCAACACGCTTGAAGGCATGATTGCCAGCCGGTCCTTGCGGCCGGGCGACCGGGTGCCGTCGGTCCGGCAGTTCAGCCAGCAGCAGCGCGTCAGCGTGCCGACGGCGTTGCAGGCGTATGCCACGCTGGAAACGCGCGGGCTGATCGAGGCGCGGCCCAAGTCCGGCTTTTTCGTGCGGCGCCATCAATTGGAACTGCCGCCGGAACCGGTGATGCGCCCGGCCAGCACGCCCCGGGCGATTGCCATTGACGGGGCGGATCCGATGGAAGCGTTGCTGGCGGATCATGCGGATTCCACGCTGGTGCCGCTGGGCGCGGCGTTGCCGAGCGCGCAGTTGCTGCCGGGCGTGAAACTGGCGCGCATCATGGCCGCCATTGGCCGCCAGCTCGGTCCGCGCAGCGTGGCTTACGACATGACACCCGGCCACGAATCCCTGCGGCGCGAACTGGCGCGGCGTTCGCTCGACTGGGGCGGCGCGTTGAACGCGGATGATTTCATGGTGACGGTCGGCGCGACGGAGGCGCTTTCGCTGGCGTTGCGCGCCACGTGCCAGCCGGGCGACACGGTAGCGGTGGAATCGCCCACGTATTTCGGTTTGGCCGGCATGTTGCGGGAATTGCAGCTCAAGGCGCTGCCGATGCCGGTGGATTCGGCGGACGGCATGGATTTGGACACGCTGGAACGGGCGTTGCGCAAAACCCGCGTCGCGGCCTGCGTGGTCATCCCGAATTTTCACAATCCCATCGGCTTCGTGATGCCGGACGCAAACAAGCGGCGGCTGATTGAGCTTTGCGTCCCGCGCGGCATTGCGTTGATTGAGGACGACACTTACGCGGATTTGCAGCACGAGGGCCCGCGCCCGCGCTCATTGAAGGCGTTTGGGCGGACGGAGGAAATTATCTTGTGCGGTTCGTATTCCAAGAAACTGGCGCCGGGCTATCGGGTGGGTTACCTCGCCGCCGGCAAATGGCAGTCGCGCGTGCGGGCGCTGAAACAGGCCAGCACGTTGAACGGCGCGCTGCTGCCAACGCTCGCCATCGCGGAATTCCTGAAGAACGGCGGCTACGACCGTTATCTGCGCACCGTGCGCCAGGCGTATCGGCAGCAGGTCAACCGGATGAAAGAAGCGGTCATCGAGAGTTTTCCCGCCGGCATCGGGTTGTCGCGGCCCAAGGGCGGATTTTTGCTGTGGTGCGAACTGCCCGCCACGGTGGACGCCGTGAAATTATCCGTGCAGGCGCGCCACGCGGGCATCAGCATCGCGCCGGGACCGCTGTTTTCGCCGGGCGGCGATTTCAAACATTTCATCCGCATCAACTGCGGTTACCCGTGGAACAGCCGGATTGAGCGGGCTGTGGGCGTGCTCGGTCATCTGGTGCAAAAGGCCGCGAAATGA
PROTEIN sequence
Length: 482
MRPAAHLQREPVYLKLANTLEGMIASRSLRPGDRVPSVRQFSQQQRVSVPTALQAYATLETRGLIEARPKSGFFVRRHQLELPPEPVMRPASTPRAIAIDGADPMEALLADHADSTLVPLGAALPSAQLLPGVKLARIMAAIGRQLGPRSVAYDMTPGHESLRRELARRSLDWGGALNADDFMVTVGATEALSLALRATCQPGDTVAVESPTYFGLAGMLRELQLKALPMPVDSADGMDLDTLERALRKTRVAACVVIPNFHNPIGFVMPDANKRRLIELCVPRGIALIEDDTYADLQHEGPRPRSLKAFGRTEEIILCGSYSKKLAPGYRVGYLAAGKWQSRVRALKQASTLNGALLPTLAIAEFLKNGGYDRYLRTVRQAYRQQVNRMKEAVIESFPAGIGLSRPKGGFLLWCELPATVDAVKLSVQARHAGISIAPGPLFSPGGDFKHFIRINCGYPWNSRIERAVGVLGHLVQKAAK*