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berkeley_reactor_200306_planktonic_scaffold_78559_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(26182..28368)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor G n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 726.0
  • Bit_score: 1276
  • Evalue 0.0
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 726.0
  • Bit_score: 1276
  • Evalue 0.0
fusA; translation elongation factor G, GTPase similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 719.0
  • Bit_score: 908
  • Evalue 9.80e-262

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2187
ATGAGCGACGCCAAATCCATCAATTCGCCCAACCGCGAATACACCCTTGAATGCACTCGCAACATCGGCATCGCCGCGCACATTGACGCCGGCAAAACCACCACGACCGAGCGGATTCTCTTTTACACCGGCCTCATTCATAAGATCGGTGACGTGGATGACGGCAACACCGTTACGGACTGGATGGCGCAGGAAAAGGAGCGCGGCATCACCATCACTTCCGCCGCGGTGACCTGCTTCTGGACGCAGAAGCACATGAAGGTGGGCGAAACCGCCATTTACAAGGCGTTCAAGGACGTGCCGCATCGCATCAACATCATTGACACGCCCGGCCACGTGGACTTCACCGCCGAAGTCGAGCGCTCCATGCGCGTGCTGGACGGCGCGGTCGCCGTGTTCTGCGGTGTCGCCGGCGTGCAGCCGCAGTCGGAAACCGTCTGGCGCCAGGCCACCAAATACAAGGTGCCGCGCATCGCGTTCGTCAACAAGATGGACCGCACCGGCGCGAATTTTGAGAACGCCCTGGCCGACATGCGCAACAAGCTCAAGGCTTATGCGTTTCCGATCTTCCTGCCGATTGGCGCGGAAGACAAATTCCGCGGCCTGATTGATGTGGTGAACCAGAAGTGTTACTGGTTCGGCGAGGGCGACGTGGTCAACGAAGGCTTGAATTTCGAGGTCAAGGACATTCCCGCCGAAGACCAGGAACGCGCCAAGCAGGCATTGGCGGATCTGATTGATGCCGTCTCCAACAAGGACGACACCATTGCCGAAATGGTTTTGGAAGAAAAGCCGATTGACGCCCCGACGCTGAAGGCGGCCATCCGCCGCCTGACCTGCAAGATTGAACTGGTGCCCGTGTTGTGCGGTTCCGCCTTCAAGAAAAAGGGCGTGCAGATTTTGGTGGACGCCGTGGTGGATTACCTGCCCAGTCCGCTGGATATTCCGGCGGCCGAAGGCACCGAGCCCGGCACGGACAACAAGGTGGTCGTTGAGACGAATGACAACGGCAAGTTCTGTTCCCTGGCGTTCAAGCTGTGGACGGATCCTTATGCGGGCAAACTGGTGTTTTTCCGCGTTTACTCCGGCAGCATCGGCAAGGGGGACACCATTTACAATCCGCGCACGCGCAAGCGTGAACGCGTCAGCCGCCTCATGGTCATCCAGGGCAGCGAACGCAAGGACGTGGAACGCGTGTATTCCGGCGACATCGCCGCTCTCGTCGGCCTGCGTAACATCACCACCGGCGACACTCTGTGCGACGAGTCCTTCGATGTGACGCTTGAACCACCGACGTTCCCCGAGCCGGTCATCAGCATGGCTGTGGAGCCCAAGACCAAGGCGGATCGCGACAAGATGTCCGAAGGTTTGCAGCGTCTGGCGGAAGAAGATCCGACATTCCGTTGCTTTACCAACGAGGAAACTGGCCAGTTGCTCATCGCGGGCATGGGCGAGTTGCACCTGGAAATCATCATTGACCGTCTCCGCCGCGAATTCAAGGTGGAGGCCAACACCGGCGCGCCGCAGATCGCGTATCGCGAAACGATCACCCAGCCGGCCGACGGCGAAGGCAAATTCATCCGCCAGTCCGGCGGCCGCGGTCAATACGGCCACGCCTGCATCAAGGTGGAGCCCAATGAAAAGGGCAAGGGCATCGAAATCGAGAACAAGGTGGTCGGCGGCACCATTCCCAAGGAATATATTCCGGCGGTCATTGACGGCATTGAAGAAGCCATCAAGAGCGGCGTGTATGCCGGTTACCAGGTCATTGACATCAAAGTTCAGGTGGTGGACGGCAGTTTCCACGAAGTGGACTCGAACGAACTGGCGTTCAAGATGGCCGGCATCTTCGCTTTGAAAGACGCCTTCAAGAAGGCCGGTCCGATCCTGCTGGAACCGGTCATGAAAGTGGAATGCACCACGCCGGACGAATACCAGGGCGATTTGCTGGGCGACATCAACCGTCGCCGCGGCATTATCAGCGGCATTGACGCCAAGAATGGCCAGACCATTCTGAATGCGCAGGTGCCCCTGGCGGAAATGTTCGGCTACGCCACCGCAATCCGTTCGCTCTCCAAGGGACGCGCGAGCTATTCGATGGAACCGCTGACGTTCGAGCAGGTGCCGAACAGCGTGCTTACCGGCATCCTCGACCAGGCGGCCAAAAAACCGGCCGCCCGCTCGTAA
PROTEIN sequence
Length: 729
MSDAKSINSPNREYTLECTRNIGIAAHIDAGKTTTTERILFYTGLIHKIGDVDDGNTVTDWMAQEKERGITITSAAVTCFWTQKHMKVGETAIYKAFKDVPHRINIIDTPGHVDFTAEVERSMRVLDGAVAVFCGVAGVQPQSETVWRQATKYKVPRIAFVNKMDRTGANFENALADMRNKLKAYAFPIFLPIGAEDKFRGLIDVVNQKCYWFGEGDVVNEGLNFEVKDIPAEDQERAKQALADLIDAVSNKDDTIAEMVLEEKPIDAPTLKAAIRRLTCKIELVPVLCGSAFKKKGVQILVDAVVDYLPSPLDIPAAEGTEPGTDNKVVVETNDNGKFCSLAFKLWTDPYAGKLVFFRVYSGSIGKGDTIYNPRTRKRERVSRLMVIQGSERKDVERVYSGDIAALVGLRNITTGDTLCDESFDVTLEPPTFPEPVISMAVEPKTKADRDKMSEGLQRLAEEDPTFRCFTNEETGQLLIAGMGELHLEIIIDRLRREFKVEANTGAPQIAYRETITQPADGEGKFIRQSGGRGQYGHACIKVEPNEKGKGIEIENKVVGGTIPKEYIPAVIDGIEEAIKSGVYAGYQVIDIKVQVVDGSFHEVDSNELAFKMAGIFALKDAFKKAGPILLEPVMKVECTTPDEYQGDLLGDINRRRGIISGIDAKNGQTILNAQVPLAEMFGYATAIRSLSKGRASYSMEPLTFEQVPNSVLTGILDQAAKKPAARS*