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berkeley_reactor_200306_planktonic_scaffold_78559_313

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 360401..361558

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZV9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 378.0
  • Bit_score: 292
  • Evalue 4.80e-76
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 378.0
  • Bit_score: 275
  • Evalue 1.30e-71
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 378.0
  • Bit_score: 305
  • Evalue 7.60e-80

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Taxonomy

R_Deltaproteobacteria_42_39 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGAACACGAAAATGAGCGAAATCACACGTCAAGAAGTGCTGGCCAAGAAGCGGGAACGCTACGCGCGGGCTGGCAAGAAACACAAAGGTAAAATCATCACCGAACTGGTCGAGTTGTTCGGCTATCATCCCAAGTCTGCCATTCGTGCGCTGCGGCCCCGCAAGGTCAGCGCGGGGCCGTTTGTGCGGGGTCGGCCCAAGGAATATGACCCGGCCAAACTGCTGCCGCCGCTCAAGGCCTTCTGGCTGGCGGCCCTGCAACCGTGCGGCGAACGGCTCAAGGCCTGCCTGACCGAATGGCTGCCCGCCTACGAGGCGGATCACCGGCGCCTCGACGCCGACGTGCGCGAGTCGTTGCTCGCCGCCAGCCGCGCGACGCTGGACCGGCTGCTCATCCCGGCGCGGATCGCCCATCGTCGCCGCGCCACCACCCGCCCGGGCAATTGGCTGCGCCAGGGCATTCCCATCCGCACCGAGTGGGCGGAACAGGCGCCGGGCTTTTTGGAACTGGACACCGTGGCGTTGTGCGGCGGCGCCTTGGATGACCGGCACGGCTGGATGTTTTCGGGCGTGGACATTCACACGACGTGGAGCGTATTGAGAGGCTTGCCCAACCGCAGCGAAGCCAGTGTTTGCGGGCAGATGGGTGATGTCGAAGCGCGGCTGCCCTTCGCCCTGCGCAGGGTGGACAGCGACAACGGCGGCGAGTTCATCAACCATCAACTGGCGAAGTATCTGACGGAACGCACGCCGCCGGTGGCCTTCACGCGATCGCGCCCGTATCGCAAGAATGACCAGGCGCACATCGAGCAAAAGAACTTCACGAATGTGCGGCAATGGTTCGGCTACGAACGCTACGAACATCCCGACGTGTGGCCGCTGGTCAACACGCTGTGCCGGGGCGCACTGGATCAACTGCTCAACTACTTCCTGCCGACGATGAAGCTCGAAAAGAAGGAGCGCGTCGGCAGCCAGACCGTGCGGCACTACGGCGTGACGCAGACGCCGCTGGCGCGGGTGCTGGCCTGCGCCGAGGTGACGGCGGAAACGAAGGCACGTTTGCAACGGGAACGGGCCGCCCTGAATCCGTTTGCGGTGCGACGAGAAGTGGACCGGCAGTTGAAAGCCATCGAAGCGAGCCGTCGCGCCACCGCTTGA
PROTEIN sequence
Length: 386
MNTKMSEITRQEVLAKKRERYARAGKKHKGKIITELVELFGYHPKSAIRALRPRKVSAGPFVRGRPKEYDPAKLLPPLKAFWLAALQPCGERLKACLTEWLPAYEADHRRLDADVRESLLAASRATLDRLLIPARIAHRRRATTRPGNWLRQGIPIRTEWAEQAPGFLELDTVALCGGALDDRHGWMFSGVDIHTTWSVLRGLPNRSEASVCGQMGDVEARLPFALRRVDSDNGGEFINHQLAKYLTERTPPVAFTRSRPYRKNDQAHIEQKNFTNVRQWFGYERYEHPDVWPLVNTLCRGALDQLLNYFLPTMKLEKKERVGSQTVRHYGVTQTPLARVLACAEVTAETKARLQRERAALNPFAVRREVDRQLKAIEASRRATA*