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berkeley_reactor_200306_planktonic_scaffold_84741_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(2761..3867)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 368.0
  • Bit_score: 581
  • Evalue 6.90e-163
tRNA-dihydrouridine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI73_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 368.0
  • Bit_score: 581
  • Evalue 4.90e-163
hydrogenase similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 369.0
  • Bit_score: 510
  • Evalue 2.30e-142

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1107
GTGCAAATCGGTTCACTGCGCCTGAAATCCAACCTGTTTCTCTCGCCGCTGGCGGGTTACACCAACCTGCCCTTCCGCCTCGTCGTGCGCGAAGTCGGCGGCGTCGGCCTCTGCACCACCGACCTGGTCAACGCGCGCTCCCTCATCGAACAGCGCGAAAAGGCGCTGAAACTCATCGAAACGCGCCCGGAAGATTCACCGCTGGCCGTGCAGTTGTTCGGCTCCGTGCCCGAGGAAATGCGCGACGCCGCGCAAATCGCCGAAGCGCACGGCGCGGTTTCCGTGGACATCAACATGGGCTGTCCCGTCAAAAAGGTCTGCAAGGTGGGCGGCGGCTCGGCCATGATGACGGAACTCGACAAAACCGCCGCGCTCGTCCGGGGCATGGTCAACGCCGTGAAAATCCCCGTCACCGCCAAGATGCGGCTGGGCTGGGACGACCAAAACATCACCGCGCCGGATCTGGCCCGCGCGCTGGAAGACGCCGGCGTGGCCGCGATTTTTATTCATGGACGAACCCGGGAACAGGGTTTCAGCGGCACGGTCAACCTGGCCGGCATCCGCAAAGTTGTCGAGGCAGTGAAACACATCCCCGTCATCGGCAACGGCGACATCGTCACGCCGCCGGCTGCAAAAAAAATGCTGGATGAAACGGGATGCGCCGGGGTGAGCATGGGACGCGGGGCGTTCTATGATCCGTGGATCTTCAAGCGAACCTTGCACCTGATCCAAACCGGCGAACTGCTGCCCGAAGAACATTTTTCCGAACGCGTCCGGGTCATGTGTCGTCATCTTGATCTGATGGTGGAAGTGTTCGGCGAGGAACTGGGCTGCCGCATGTTTCGCAAGGTGGCGCCGTGGTATGCCAAGCGGTTCGGACCGTGCCATGAATTCAATAAACAAGTCGTCCACATTTCCACCCGGGCGCAATTTCATGACGTGCTGGAAAACTACACGCGCTGGCGGGAAAAATTTCTGGACGAAACCGGCGAACTGCACATCCGTTTCCAGCCCGCGCCACTGGTCGCGTCCTTCATGCGTGACGATCCGCCTTCCACGCAGCGACAGCACATTCCCGTGCCCCAAGGGCCGGTGGAAGTGTGGTGA
PROTEIN sequence
Length: 369
VQIGSLRLKSNLFLSPLAGYTNLPFRLVVREVGGVGLCTTDLVNARSLIEQREKALKLIETRPEDSPLAVQLFGSVPEEMRDAAQIAEAHGAVSVDINMGCPVKKVCKVGGGSAMMTELDKTAALVRGMVNAVKIPVTAKMRLGWDDQNITAPDLARALEDAGVAAIFIHGRTREQGFSGTVNLAGIRKVVEAVKHIPVIGNGDIVTPPAAKKMLDETGCAGVSMGRGAFYDPWIFKRTLHLIQTGELLPEEHFSERVRVMCRHLDLMVEVFGEELGCRMFRKVAPWYAKRFGPCHEFNKQVVHISTRAQFHDVLENYTRWREKFLDETGELHIRFQPAPLVASFMRDDPPSTQRQHIPVPQGPVEVW*