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berkeley_reactor_200306_planktonic_scaffold_84741_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(6825..7955)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III delta n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNK6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 368.0
  • Bit_score: 529
  • Evalue 2.30e-147
DNA polymerase III delta {ECO:0000313|EMBL:EEF58546.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 368.0
  • Bit_score: 529
  • Evalue 3.20e-147
DNA polymerase III subunit delta similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 364.0
  • Bit_score: 151
  • Evalue 4.70e-34

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1131
ATGGCGGCCAAGACTTCCACGTCCTTGGCGCTGATCTGTGGCGATGACGACTTCGCCGTGAAACAACGCGCCCGCCAGCTTTTCCAGGAGTGGTCCGCGGAACTGGGCGGCATGGACCATGAAACCATCGAGGCCGGGGTCACCAACAGCGGCGAGGCGTTGAAAATTCTCGGCCGGCTGCGCGAGGCCCTGCAAACCCTTCCCTTTTTTGGCGGCGGCAAGGTCGTCTGGCTGCGCGACTGCAATTTCCTCGGCGAAGAACGCACCGCTTCATCCGCCGCCGTGACCGAGGCGCTGGCCGGTCTGGCGGAGGAATTGAAACAATTTTCCTGGCAGGGCGTGCGCCTGATCGTCAGCGCCGGCAAGGTGGACAAGCGCAAGGTTTTCTACAAGACGCTGGACAAGCTCGGCTCGGTGGAAATTTTTTCCGCGTGGTCAGCGGAGGACAAGGATTGGACCGAACGCGCGGAAGCCGCCGCCCGCACTGCCTTCCGGCAGCGCCAAAAGGAAATTTCCGAGGACGCCCTGGCCGAACTGATCAACCGCGTCGGCCCCAACGCCCGGCAACTGGAGAGCGAAGTCGAAAAGTTGAGCTTGTTCACCGGCGACCGCCAGCGGATCGAGCTGGCCGATGTCGCGGCGATTTGTTCCCGCAACAAAACCGCCCGGGCGTTTGCGCTCGGCGATGCGCTCGGCGACCGCAACCTGCCCGCCCTGCTCCGCCGCCTGGACGAGGAGCTCTGGGCCACCCAATACGAGAAGGACAAATCGGAAATCGGCCTGCTTTACGGCCTGATCGGCAAGGTGCGCGCGATGCTGTTTCTGCGGGAAATGCTGCGCGAAGGCTGGATCAAGGAAACGCGGGACTACAATTCATTCAAGGCGCAATTGCAGCGCGTGCCGGCGGACCGGTTGCCGGCGGATAAAAAATTCAATCCACTGGCGCTGAATCCGTATGTGTTGTTCAAGGCGCTGGCGCAGGCCAAAAAATACTCGACGGCGGAGCTGGTCCGGGCGATGGAAATTTTATTGCAATGCAACCGGCGGCTGGTTTCCAGCGGTTTGGACGAAGCACTTGTATTGCAGCAGGCCTTGGTGCAAATTGTCACGCCACAGGCCGTCGCCGCCTAA
PROTEIN sequence
Length: 377
MAAKTSTSLALICGDDDFAVKQRARQLFQEWSAELGGMDHETIEAGVTNSGEALKILGRLREALQTLPFFGGGKVVWLRDCNFLGEERTASSAAVTEALAGLAEELKQFSWQGVRLIVSAGKVDKRKVFYKTLDKLGSVEIFSAWSAEDKDWTERAEAAARTAFRQRQKEISEDALAELINRVGPNARQLESEVEKLSLFTGDRQRIELADVAAICSRNKTARAFALGDALGDRNLPALLRRLDEELWATQYEKDKSEIGLLYGLIGKVRAMLFLREMLREGWIKETRDYNSFKAQLQRVPADRLPADKKFNPLALNPYVLFKALAQAKKYSTAELVRAMEILLQCNRRLVSSGLDEALVLQQALVQIVTPQAVAA*