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berkeley_reactor_200306_planktonic_scaffold_84741_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 8543..9724

Top 3 Functional Annotations

Value Algorithm Source
endo-1,4-beta-xylanase n=1 Tax=Spirosoma luteum RepID=UPI000368975D similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 363.0
  • Bit_score: 427
  • Evalue 7.40e-117
Uncharacterized protein {ECO:0000313|EMBL:CCH53593.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 359.0
  • Bit_score: 417
  • Evalue 1.80e-113
glycoside hydrolase similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 316.0
  • Bit_score: 411
  • Evalue 1.60e-112

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1182
ATGACCACGGAATTGCTTGGAATGCGTTTCGGCCGCAACCTGACTTTGATTGCAAAATGCCTTGCAAACGGCGTTTTCAGCTTGCTGCTTTTGTGCGCGGGAGCCAACGCGTTTGGCGCGCCGCCAACCGGGCTGACAACCAACCCGCCAGCGGATTCGATTTTGACCGGGCGGCGCGAATCGCCAGCCGGACAAACCAGTTCGCACTGGTGGTTGATGGCTTACTTTCGGCAGCGCTATGACTCGCGCGTGGAAATTGACGCGGCCGGAAAAATCCACAATGTGCCGCTGCCCAATCCGATGCGCGACGAGCAACTGCACTTCGCGCTCTCGCACGACGGGCGGCATTGGACGCCGCTCAACGGGAATCGTCCGGTTTGGAACCAGCGGCTGCGCGATCCGTTTCTCGCGCGGGACCAGAACGGCGTCTGGCGGCTGGTCGCTACCGGCGGCCAACGCGGATCGGGTGGAACCAATCAAGGCCCAACCTGTCTTTACGCCACGTCGCGCGATTTGATCACCTGGGAAGATGTTCGCTCGTTAAACCCGATGGCAGGCGTTCGGAACGACGACGGGTTGCCCGCCGGGAACGTCTGGGCACCCGAATGGTTTAACGACCGGAAATCCGGTAACTTTGTTCTGCTTTGGTCGTCGTCGTTTGCCGGCGCCGGCTGGAAGCAGAGCCGGATTTGGTGGACGCACACTCGCGATTGGCAGACGTTCGCGCCGGCGAAAGTATTGTTCGCGCCGCCATACTCGGCCATTGACGCCACGTTGATCGAACACGGCGGAACATACTACCTTTTTCACAAGGAAGAAGAATTTGGCGCGGCCACCGGCGAGCGACGGGCGATTCGTCTGGCCACTTCCCAGCAGTTGGCCGGGCCGTATCAAGTTTTCGACGGCCCGCTCAATCACGGCCAAATTGCGCCCACCATCACCGAAGGTCCGAGTGTCTTGCGCGATCCGCAGGGAGCAGGGTGGCTGCTGCTGTATGATTACTGCATGAGCGATGCGTATGGCGCATCCGTTTCGCCGGACTTGCTGCACTGGTCGGTTGTGTCTTCCGTGACGTTTCCGCCGGATGCGCGGCACGGTTGTTTTGCTCCGCTGACGGATGCGGAAGCAAAACTTCTGCTGGAAAAATTCGGCGCAAAAACGGTTGACCCCGCCAGTCGTTAG
PROTEIN sequence
Length: 394
MTTELLGMRFGRNLTLIAKCLANGVFSLLLLCAGANAFGAPPTGLTTNPPADSILTGRRESPAGQTSSHWWLMAYFRQRYDSRVEIDAAGKIHNVPLPNPMRDEQLHFALSHDGRHWTPLNGNRPVWNQRLRDPFLARDQNGVWRLVATGGQRGSGGTNQGPTCLYATSRDLITWEDVRSLNPMAGVRNDDGLPAGNVWAPEWFNDRKSGNFVLLWSSSFAGAGWKQSRIWWTHTRDWQTFAPAKVLFAPPYSAIDATLIEHGGTYYLFHKEEEFGAATGERRAIRLATSQQLAGPYQVFDGPLNHGQIAPTITEGPSVLRDPQGAGWLLLYDYCMSDAYGASVSPDLLHWSVVSSVTFPPDARHGCFAPLTDAEAKLLLEKFGAKTVDPASR*