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berkeley_reactor_200306_planktonic_scaffold_84741_34

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 37312..39855

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017465A5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 830.0
  • Bit_score: 797
  • Evalue 1.30e-227
UPF0753 protein WP12_11365 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 845.0
  • Bit_score: 728
  • Evalue 8.00e-207
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 848.0
  • Bit_score: 711
  • Evalue 2.00e-202

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Taxonomy

Sphingomonas sp. SRS2 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2544
ATGAACCTCGCCTTGGAACCCGCCCTCGCCGCCGCCGGCGAAAAGTCCGCCCGCCACAACGTCATCCGCGCGGCGTGCGACCGCATCCCGCCGCTCTGGCCATTGAAAAATTTTGTCGCCGTGAATCCCTTCCTCGGGCTGGTCGGCCGGGATTTTCTGGACGCCGCCCGGCTCGTCAAACACGTGGGGCACGCCGACCTGCTGATGCCGGCAGCGTATTATCGGGAGCAAATTCGCAACGGGCGAATCCAGTCGGACGATCTCGCTGCGGCGCTGAAACTGGCGGAACCATCGCTGGCGACGGAATGGGGTCAGCCCTTTCAGGGCATGGATCTTCCCGGACTGGAGGAGGGGTTGTCCCGTAATTTTACGGAGGCCGCCACGGAGCAGGAGCTGACCTTTGCCGAATTTCTGGATGCGGCGAACCGCACGAATTGGGCGGCGTTCGTGGTGGAGGAAATTTCCAAATGGTGCTCCGCTTATTTTGATCAGGGACAATCCGCCTGGCGCATGCCCTGGCGGGAATCCGGCCTGCTGGCGGCCTGGAAACAAGCGGCCGCACTGGACGCGAATCCGGAGTTGATGGGCATCCGAAACTTCCGAAAATTTGCGGCTGCGTTGCCGGACGATCCCGTTGAAATTATTGACCGGGCGCTGGCCAGACTGGAAATTCCAGAACCGGCGCAGACCAATTTTTTGCATCGGCAACTGATGAGCCTGCCCGGGTGGAGCGGTTATCTTCAGTATCGCGTCCGCGAAAAACGCCTGGCCGGGACGAATGATACCACGCTGGTCGAGTTTCTCGCCATCCGCCTGATTTACGATCTGGCGCTGCTTCAGGCGTTCGGCGGCGCGCCGGAGATTTTCGCCAATTGGAAACAACACGTGGCCGCAAGCGGGGAATTTGAAAGCCGGATGCCGGCGGGACTGTTGATCCGCCACGTGGCGCAGCTCGCGCTGGAATGCGGTTATCAAAGGGAATTGATCCGCCGGCTGCAAACGAAGCTGGTGGTTCCGGCCGCGCCAAATCCAAAAACGTTGGCGGCGGTTTTCTGCATTGACGTGCGCTCGGAAGTGTTCCGGCGGGCGCTCGAGGCCCAGTCTGATGAAATCGAAACGATTGGCTTCGCCGGATTTTTCGGCATGCCGATTGAGTATCACCGGTTTGGCCAGCCGGAGGGAAACGCCCAGTGTCCGGTCCTGCTAACGCCGAAATTCAAGGTGCGGGAAACCATGCGGCACGGTGATGCCGGCGGCGAAGCGCGATGGCAGCGGCGGCGGCATTTCCGGCAGACGGTGAGCGGCGCCTGGAATGCGTTCAAGACCTCGGCAATTTCGTGTTTCTCCTTCGTCGAAACCGCCGGGCTGTGGTTCGGGGTGAAGCTGGCGAAAGATTCCCTGGGGCTCACGACGGCGGATCTAGGCTACGCGACCGCGAACCGGAAGCGCCGGTTCGCGCCCCGGATCGAGCGCGAAGCGTGTTGCCGGGACGCCCAAGATGCGGGTGCCGGCACGGGCCTGTCGCTGGCCGATCAAATCGGACTGGCCGCCGGCGCCCTGAAAAACATGGGCCTGGTTTCCCATTTTGCCAGAGTCGTGCTGCTGTGCGGTCACGGCAGTGCCACGGCCAACAATCCTTACGGCTCCGCGCTCGATTGCGGCGCTTGTGGCGGCCATGCGGGCGACGCCAACGCCCGGGTGGCGGCGGCCATTTTGAACGAGCCGGCGGTTCGCGCGGGCTTGAAGGAGCAGGGGATCGAGATTCCCGCCGCCACGGTGTTCATCGCGGCGCTGCACAATACCACCACGGACGAAATTCTGGTTTACGACGACGTCGCGCTGGCGCCGGAACAGGCGGCGGAATTGGAAAAAATCCAGGGCTGGCTGCGGGCCGCCTCCCGCCAGGCGCGGCGCGAGCGGGCACCGTCGCTGGGACTGGGCGAAAGCGCGGAGGCGGATCTGCACCGTCAGTTTCGGGCGCGCAGCCGCGACTGGTCCCAGGTGCGGCCTGAATGGGGACTCGCCGGCAACGCCGCGTTCATTGCCGCGCCGCGGGAGCGAACCCGGGGAATCCATCTTGGCGGCCGGGTGTTTTTACACAATTATCAGCCGCAGCTGGATGCGGACAAGTCCACCCTCGAACTCATCCTGGTCGCGCCGATGATTGTGGCCACTTGGATCAATCTGCAATACTATGGCTCCACGGTGGACAATCGCGTCTTCGGCAGCGGCAACAAGGTGTTGCACAATGTCGTCGGCACGTTTGGCGTCTGGCAGGGGAACGGCGGCGACCTGCAATCCGGGCTGCCCCTCCAATCCCTGCATGACGGCCGGCGGTGGCTGCACGAGCCGCTGCGTTTGAGCGTCTTCATCGAGGCGCCCTGCGCGGAGATCGAGCGGGTGATTGCGCGGCATCCGGAGGTGCGCCAGTTGATCGAAAATCACTGGATCCACCTGTTCGCGCTGGAACCCGGTGGCGGACGAATCTGGCGTCATACCGGTGGCACATTCCAACCGGAGACGCGACCAGTTGACCGAAATTAG
PROTEIN sequence
Length: 848
MNLALEPALAAAGEKSARHNVIRAACDRIPPLWPLKNFVAVNPFLGLVGRDFLDAARLVKHVGHADLLMPAAYYREQIRNGRIQSDDLAAALKLAEPSLATEWGQPFQGMDLPGLEEGLSRNFTEAATEQELTFAEFLDAANRTNWAAFVVEEISKWCSAYFDQGQSAWRMPWRESGLLAAWKQAAALDANPELMGIRNFRKFAAALPDDPVEIIDRALARLEIPEPAQTNFLHRQLMSLPGWSGYLQYRVREKRLAGTNDTTLVEFLAIRLIYDLALLQAFGGAPEIFANWKQHVAASGEFESRMPAGLLIRHVAQLALECGYQRELIRRLQTKLVVPAAPNPKTLAAVFCIDVRSEVFRRALEAQSDEIETIGFAGFFGMPIEYHRFGQPEGNAQCPVLLTPKFKVRETMRHGDAGGEARWQRRRHFRQTVSGAWNAFKTSAISCFSFVETAGLWFGVKLAKDSLGLTTADLGYATANRKRRFAPRIEREACCRDAQDAGAGTGLSLADQIGLAAGALKNMGLVSHFARVVLLCGHGSATANNPYGSALDCGACGGHAGDANARVAAAILNEPAVRAGLKEQGIEIPAATVFIAALHNTTTDEILVYDDVALAPEQAAELEKIQGWLRAASRQARRERAPSLGLGESAEADLHRQFRARSRDWSQVRPEWGLAGNAAFIAAPRERTRGIHLGGRVFLHNYQPQLDADKSTLELILVAPMIVATWINLQYYGSTVDNRVFGSGNKVLHNVVGTFGVWQGNGGDLQSGLPLQSLHDGRRWLHEPLRLSVFIEAPCAEIERVIARHPEVRQLIENHWIHLFALEPGGGRIWRHTGGTFQPETRPVDRN*