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berkeley_reactor_200306_planktonic_scaffold_89890_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 4787..5494

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U9P6_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 235.0
  • Bit_score: 254
  • Evalue 8.80e-65
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 226.0
  • Bit_score: 245
  • Evalue 1.20e-62
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 232.0
  • Bit_score: 306
  • Evalue 2.10e-80

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Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 708
ATGGATGCCGTTCCGCCGTTCCAGCAATTGTTTGACCTGCTGCCGGACGTGACTTTTTTCATGAAAGACCGGCGCGGCCGCTTTGTCATGCGCAACCGGCACGGTTGCGAATACTGCCGGGTGACGTCCGAACGCGAGCTCATCGGCAAGACGGATCATGATTTTCACCCCAAAAGTCGCGCCGACATGTATGTGAAAGGCGACCAGCAGGTCATGCGCACCGGCATCCCCATCATCAACGCGATCGAACCGGCGCCCGAGGAGGATGGTTCCGACCGGCTGATCATCTGCAGCAAGGTGCCGGTGAGGGACCGGCACGGACGTGTGATCGGCATTGCCGGGATTCATCGCGAGGTGGAAGGATTCCGGGCGACGCCCAAATCCTACGGCCGGCTCTCCGAAGCCGTGCGGCATTTGCACCATCACTACGCGAAACCGCTCACCACGCGGCAACTGGCGAAAATGGTGGGCGTTTCCACCAGCCAGTTCGCCCGCCGGTTTCATAAATTATTCCATGCCACCGTGCGACAATATCTGCTGCGCATTCGCGTCCGGTCCGCCTGCCGCCTGCTGGCCCAGAGCGAAAAAAACATCACTGAAATCGCGGTGGCAGTGGGGTTCTACGATCACGCGCATTTTTCACGAACCTTTTCAAAATTGATGGGCATCGCGCCGCTGGCCTACCGCAAACAGCACCAGGCGGGCTGA
PROTEIN sequence
Length: 236
MDAVPPFQQLFDLLPDVTFFMKDRRGRFVMRNRHGCEYCRVTSERELIGKTDHDFHPKSRADMYVKGDQQVMRTGIPIINAIEPAPEEDGSDRLIICSKVPVRDRHGRVIGIAGIHREVEGFRATPKSYGRLSEAVRHLHHHYAKPLTTRQLAKMVGVSTSQFARRFHKLFHATVRQYLLRIRVRSACRLLAQSEKNITEIAVAVGFYDHAHFSRTFSKLMGIAPLAYRKQHQAG*