ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_89890_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 35622..37322

Top 3 Functional Annotations

Value Algorithm Source
von Willebrand factor type A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFD1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 516.0
  • Bit_score: 494
  • Evalue 1.20e-136
von Willebrand factor type A {ECO:0000313|EMBL:EEF61295.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 516.0
  • Bit_score: 494
  • Evalue 1.70e-136
Mg-chelatase subunit ChlD similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 516.0
  • Bit_score: 330
  • Evalue 6.60e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1701
ATGAGATTTGAAAATCCTAATTTGCTCTGGTTTCTACTGGTGATTCCGCCGGTGTTGGCCTTGTTTTTCTGGTGGGGAGAACGAAGGCGGCGCAGCCTGCTGACCCAGTTCGTTGAATCACGCCTGCTGGCGGCGTTGACGGCGGGCATTTCGCCAGCGCGGAGAAAATTTCGGTTTAGCCTGTTCATTCTTGCGGTCGCGCTGTTGATCATTTCCGTCGCCCGGCCGCAATATGGCTACGACAAAGTCACGGTGGAACAGAAGGGGCTGGACATCGTCGTGGCGGTGGATACTTCCAAATCCATGCTGGCCACGGACATCGCGCCCAGCCGGTTGGAACGCGCGAAACTGGCCGCGCTCCAATTGATGCAGACGGCCAGGGCGGATCGGCTGGGGCTGGAGGCGTTTGCCGGAGATGCGTTTCTGGAATGTCCGTTGACGATTGACAACACGGCCTTTCAGCAGAGCGTGCAGGAATTAAATGTGAATTCCATTCCGCAAGGGGGAACCGCTTTGGCGGCCGCGATTGATACGGCCGTGAAAGCCTTCAAAGAAAACGATCATTTCAAGGTGCTGGTTTTGCTGACCGACGGTGAGGACAATGACGAAGGCGCCTTGGCGGCGGCCCAGGCGGCGGCCAAAGCCGGACTGAAGATTTTTACCATCGGCATTGGTTCGGCTGAAGGCACTTTGGTGCGGGTGCCGGACGGCAGCGGCGGCACGGATTACATCCGCGACGCAAAAGGACAGGTGGTGAAGACCAAATTGAACGAGGCCTTGCTGCAACAGATTGCGGAAACCACGGGCGGATTTTATTTGCCGCTGCGCGGGGCGAATACGATTGACACACTTTACACGCGCGGTTTGGAACCTTTGCCGAAAGCGGAAGGGCAGGAACGGATGATGCGGCGTTATCACGAGCAATTTCATTGGCCGCTGGCGGCGGCGATGCTGTTGTTGCTCGCGGAATTTTTGGTGCCGGAACGCAAGCGGAAGCCGGCGAGTTTGAACAGCGACCGCCCCCGGCTCCGGGAGCGGGAGAAACGCGCCCGGCGTCCCGGAGCGGCGGCCTTGCTGGTCTTGATAACCCTGCTGGGCCTGGCCGGAAAAAGTTCCGCGTCGCCGGCGGACGCATTGCGTGCTTACAAGGCCGGCAATTACACGAACGCCCTGAACGAATTCACCCGGCTGGCGGAAGTGAAAACGAACGATTTGCGCCTGGTGTTCAATGCCGGCACGGCGGCGTATCGCGCCACGAATTTTGACCTGGCGCAGAGTTTGTTTGAAAAATCGGCGTTGTCGCCGGATTTAAAGCTGCAGCAGATGGCCTTTTACAACCTGGGCAACACGCAATTCCAATTGGCGAAACAGGCGAAGGATCTGGACGGCTTGCAGGAAGGATTGGAAACGGCGGAGAAAACCTACGAGCGGGCCGTCAATTTGAACACCAACGATGCCGATGCTAATTTCAACCTGGCCTTTACAAAGAAGACCATTGAGCAAATCAAGGCGTTTCGCGAAATGATGCGGCGTGCCAAGAGCGAGGCGGATACGGCGGTGCGGCGCGCGGAATTTCACAAGGCGCTCGAAATCATGGCGCCGCTGGAAAAGACCATTGCCGCCAAACAGTTCAAGGACTTTATCACGAAATTGAAGAACATTGATGAAATTAAGAATCCCCAGCCTGCTCCTCAGCGTTAG
PROTEIN sequence
Length: 567
MRFENPNLLWFLLVIPPVLALFFWWGERRRRSLLTQFVESRLLAALTAGISPARRKFRFSLFILAVALLIISVARPQYGYDKVTVEQKGLDIVVAVDTSKSMLATDIAPSRLERAKLAALQLMQTARADRLGLEAFAGDAFLECPLTIDNTAFQQSVQELNVNSIPQGGTALAAAIDTAVKAFKENDHFKVLVLLTDGEDNDEGALAAAQAAAKAGLKIFTIGIGSAEGTLVRVPDGSGGTDYIRDAKGQVVKTKLNEALLQQIAETTGGFYLPLRGANTIDTLYTRGLEPLPKAEGQERMMRRYHEQFHWPLAAAMLLLLAEFLVPERKRKPASLNSDRPRLREREKRARRPGAAALLVLITLLGLAGKSSASPADALRAYKAGNYTNALNEFTRLAEVKTNDLRLVFNAGTAAYRATNFDLAQSLFEKSALSPDLKLQQMAFYNLGNTQFQLAKQAKDLDGLQEGLETAEKTYERAVNLNTNDADANFNLAFTKKTIEQIKAFREMMRRAKSEADTAVRRAEFHKALEIMAPLEKTIAAKQFKDFITKLKNIDEIKNPQPAPQR*