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berkeley_reactor_200306_planktonic_scaffold_89890_61

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 74846..77425

Top 3 Functional Annotations

Value Algorithm Source
ramA; alfa-L-rhamnosidase (EC:3.2.1.40) similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 869.0
  • Bit_score: 1063
  • Evalue 0.0
Alfa-L-rhamnosidase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5R9A1_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 844.0
  • Bit_score: 1072
  • Evalue 0.0
Alfa-L-rhamnosidase {ECO:0000313|EMBL:EMI15950.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 844.0
  • Bit_score: 1072
  • Evalue 0.0

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Taxonomy

Rhodopirellula maiorica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2580
TTGATTCATTCAAATGACTGGATAGCGCATTATATTTCGTTTCATGACACAACTTCGCTCTGGACCAACAAAGACAAACTGTTCCTTCCTCCGGCGCATCAGTATCGAAAGGAATTCAGCGTTCCACACAAGATCAAACGCGCTACCCTTTACGCAACGGCACTGGGAATTTACGAACTCCACCTGAATGGTCGACGCGTGAGTGATTCTCGGTTCGCACCAGGTTGGACTGATTATCACAAGAGCGCCTATTACAATACCTATGATGTTACATCACTTGTGCGGAAAGGCGACAACGCTCTCGGTGCGTGGGTAGCCGACGGCTGGTATGCTGGTTACATCGGCTTTGGGTTGCTCACTGGCATCGGTACCGAGCATATTGGCCGTTATACTTATGGAAAGACGCCCGCGTTCATGGCGCAGTTGGAAATAGAATACTTTGATGGTTCGCGAGAAATCATTCCCACTGACACCTCTTGGAAGGAAACTGGCAAAGGTCCGATTCGCGAGGCGGATTTTCTGATGGGCGAATATTACGACGCCCGAAAAGAAATGTCCGGCTGGGACCAACCGGGTTTCAATGATTCAAACTGGCAATCGGTGATTCTGGCCTTGGAGAATGGCAGCATTCCCGCGATGTTTTATGAGTACCAGAATCCAACCAATGTTTCTGGATATCCTACAATCGAAGGGCATCCGGTGGACCTTGGATTTCGGCGGCCGCCGAAACTGGAAGCGTATCCCGGTGTACCGGTACGCCCGATGCAGGAGATCAAGCCGGTGACCGTTACCTCGCCGACGAACGGCGTTTATATTTTCAACTTTGGCCAGAATTTTGCAGGCGTGACCCGTCTCAGAGTCAAAGGCCCAGCCGGCGCGATCGTTCGCCTACGCTACGGCGAGCAGTTACATGCTGATGGCAGCTTAATGGTCGAGAATTTGCGCAAGGCACGAGCCACCGATTACTACGTTCTGCGAGGCGATCCGCACGGCGAGACCTACGAAGAGCACTTTACCTACCACGGCTTTCAGTATGTGGAGGTAACCGGCTTCCCGGGTCGGCCGGGAAAGGCCGCCATCACGGGCATTGTATTGCAAAGTGACACGCCGCCGACGAGTGATTTTGAGTGCAGTGATCCCATGGCCAACCGACTCTTCAAGAACATCGTCTGGACCCAGCGGGCAAATTTTATGGACATCCCCACGGACTGTCCACAACGCGACGAGCGTTTCGGTTGGACGGGGGACGCGCAGATATACGTTCACTGCGCCACGCTCAACGCGGATGTGGCAGCGTTTTACACAAAATGGATACGGAACCTAATGGCTGCGCAAAGGCCCAGCGGTGTTTTTCCTGGCTACGCCCCGTTTCCCTTCCAGCACGGCTGGGATTTCGGCACGGCGTGGTGTGATGCGGGTGTTATCTGTCCGTGGACGATTTGGCAAGCTTATGATGACAAGCGGATTATCAGAGATTTCTGGCCGAATATGGTGAAGTTCATGGCTTGGCGCAAGGCGACGAGCACGAATTATTTGGGTGTAATTCACGGTAATGATTGGGGTGACTGGCTTTCGTTCGGGAAAAAGACACCGCTAGACTTTGTGGATACCGTTTATTTCGCCTACTCGGCGAAACTGATGTCGGAAATGGCTGCTGCCATAGGGAAGGTTCAAGACGCTGTTTCTTACCAGCAACTGTTTTGTAAAATCAAGGCTGCGTTTGACCATAAATACTTGCGGCCTGACGGTTCGCTGACGGTGGATACGGAGACGGCCTATGCGCTGGCATTGTTCATGGATTTAATTCCCGACAACTTGCGTGAGCAGTCCGGAGAAATTCTGGCAGACAAGCTGCGAGCAAGCGTAACTACCGATAATTCTGGGATGACCACTGGCTTTCTAGGCACCCGCCCGTTGCTGCCGGTGCTAACGAGTGTGGGCCAGAACAATCTTGCAGTGAAACAGTTTCAGACATTGAAATTTCCGTCTTGGGGTTACGAAGTGGCACAAGGGGCGACGACCATCTGGGAACATTGGGACAGTTACACTAAGGCGCATGGGTTTGGTGGAATGGATGGAACGCAGAACGCATCGATGAACTCCTTTGATCACTATTCGTTCGGGGCAGTAGGCGAATGGATGATCAACGATCTGGCCGGCATTCAGGCAGGAAGTCCCGGCTACGCACAAATCATCATTCGCCCGCATCCACCCGCGCCAGAAAGCAACCGGGAACATACTCCAATCAGCTGGGTGAAAGCGCATTATGATTCGATCCACGGCCGGATCGTCAGCAACTGGAGCTTGAAGAAAGGCCGGTTTGAACTGAAAACTACAATTCCGGCCAACACCACCGCCATCGTCTATCTGCCGACGATTAAACCTGGCACCATTACAGAGTCTGGCCAATCGCTCGCTGAGTCAAAGGATGTCCGGTTGCTGAAAGTAGTAGGAGGTTCCACGATCTTGGCCATTGGGGCAGGCACGTATCGCTTTGCGACTTCCGCATTTGAAGTGCCAACCGCTTGCACTAGAGCCGCAGCAATTTTGAGAAGCAATGCAGCCTGTGTTGCAAAATGA
PROTEIN sequence
Length: 860
LIHSNDWIAHYISFHDTTSLWTNKDKLFLPPAHQYRKEFSVPHKIKRATLYATALGIYELHLNGRRVSDSRFAPGWTDYHKSAYYNTYDVTSLVRKGDNALGAWVADGWYAGYIGFGLLTGIGTEHIGRYTYGKTPAFMAQLEIEYFDGSREIIPTDTSWKETGKGPIREADFLMGEYYDARKEMSGWDQPGFNDSNWQSVILALENGSIPAMFYEYQNPTNVSGYPTIEGHPVDLGFRRPPKLEAYPGVPVRPMQEIKPVTVTSPTNGVYIFNFGQNFAGVTRLRVKGPAGAIVRLRYGEQLHADGSLMVENLRKARATDYYVLRGDPHGETYEEHFTYHGFQYVEVTGFPGRPGKAAITGIVLQSDTPPTSDFECSDPMANRLFKNIVWTQRANFMDIPTDCPQRDERFGWTGDAQIYVHCATLNADVAAFYTKWIRNLMAAQRPSGVFPGYAPFPFQHGWDFGTAWCDAGVICPWTIWQAYDDKRIIRDFWPNMVKFMAWRKATSTNYLGVIHGNDWGDWLSFGKKTPLDFVDTVYFAYSAKLMSEMAAAIGKVQDAVSYQQLFCKIKAAFDHKYLRPDGSLTVDTETAYALALFMDLIPDNLREQSGEILADKLRASVTTDNSGMTTGFLGTRPLLPVLTSVGQNNLAVKQFQTLKFPSWGYEVAQGATTIWEHWDSYTKAHGFGGMDGTQNASMNSFDHYSFGAVGEWMINDLAGIQAGSPGYAQIIIRPHPPAPESNREHTPISWVKAHYDSIHGRIVSNWSLKKGRFELKTTIPANTTAIVYLPTIKPGTITESGQSLAESKDVRLLKVVGGSTILAIGAGTYRFATSAFEVPTACTRAAAILRSNAACVAK*