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berkeley_reactor_200306_planktonic_scaffold_112900_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 135..1604

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMU8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 488.0
  • Bit_score: 649
  • Evalue 2.50e-183
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EEF58873.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 488.0
  • Bit_score: 649
  • Evalue 3.60e-183
outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 472.0
  • Bit_score: 445
  • Evalue 1.60e-122

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAAAAAAGTGATCATGGTTTTCATGCCGGCGTTGCTGGTGTTCGCCGGTTGTGCCGTCGGACCGGATTACAAACGCCCGGCAACGACGGAAGCGCCGGCGCAATACAAAGCCGAAGCCCTCGGTTCCTGGAAACAAGGCCAGCCATTGGATAATGTTCCCAAAGGCCAATGGTGGGAAATTTTTGGCGATACCAACCTGAACGCGCTTGAAGCCCGGGCGGTGTCGGCGAACCAGGAATTGAAAGCCGCCATGGCCCGCGTGGACCAGGCCCGCGCCGTGGCCCGCGTGACGCGCAGTGAACTGCTGCCGCACCTCGACTTCAATCCGAGCTACACGCGCCAGCGGTATTCGCCGAACGCCGACCCCAGTTTCGGCAGCCTCACGGCGAACAGTTTCAGCATGCCGCTGGACTTGAGCTACGAAGTGGATTTGTGGGGCCGCGTCCGCCGCGGATTCGAGAGCGCGCGGGCCGATGCCGAGGCGTCGCTCGCTACTTTTTACAATGTCCTGCTCACACTCCAGTCGGACGTGGCGGAAAATTATTTCACCCTGCGCTCGATGGACGCGGAGATCGCCACGGTCACCGGCACGGTGCGGTTGCGCCAGGAGCAGGTGCGGCTGGTGCGCAGCCGGTTTGAAGGCGGCATCGGCAGCGAATTGGACGTGGCGCGCGCGGAAACCGAGCTCGCGACCACGGAAGCGGAGGCCGCCGCCTTGCAGCAGCGCCGCGACCGGATGGAAAACGCCATCGCCATTCTGGCCGGCCAAAATCCCAGCAACTTCAAACTGGCTCCCTTGAGCGCAGCGGAAAACCTCTGGGATCCGCAAACGCCCGTCGTCCCGGCGGGCCTGCCGTCGGATTTGCTGGAACGCCGTCCCGATGTCGCCGCCGCCGAACGCCAACTGGCCTCCGCCAATGCCAGGATCGGCGTTGCCAAAGGGGCATTCTTCCCGGTGCTGACACTGACCGGCTCGGGAGGCTACTTGAGCGGCGACGTGGAAGATCTCTTTAACTGGAACAGCCGCACCTGGTCCATCGGCCCGAGCGTGTCGCTGCCGATTTTTGCCGGCGGCCGCAACCGCTCGAACCTGGAACGCGCCCGCAGCGTTTACGATGAAAGCGTGGCGTTGTATCGCCAGCAGGTGCTGGTGGCGTTTGGCGACGTGGAGGACAGCCTTTCGGCGATCCGGCATCTGGCCGACCAGGCCGAGGCGCAGTCCCGCGCCGTCACGTCCGCCAAACGCGCCGCCAGCCTGGCCGAAGACCGCTATCGCTCGGGCATCGTCGCCTACATCGAAGTCGTGGATGCGAATCGCGACGAACTGTCCGCCGAGCGCGCGAACGCGCAACTGGCCGGCGAACGTTTGATCGCCACCGTGCAACTCATCAAGGCGCTGGGTGGCGGCTGGAATGAAAATGACAGCGTGGCCAGCATTTCGCCGGCTGCGGAGCCGCGGTCAAAATGA
PROTEIN sequence
Length: 490
MKKVIMVFMPALLVFAGCAVGPDYKRPATTEAPAQYKAEALGSWKQGQPLDNVPKGQWWEIFGDTNLNALEARAVSANQELKAAMARVDQARAVARVTRSELLPHLDFNPSYTRQRYSPNADPSFGSLTANSFSMPLDLSYEVDLWGRVRRGFESARADAEASLATFYNVLLTLQSDVAENYFTLRSMDAEIATVTGTVRLRQEQVRLVRSRFEGGIGSELDVARAETELATTEAEAAALQQRRDRMENAIAILAGQNPSNFKLAPLSAAENLWDPQTPVVPAGLPSDLLERRPDVAAAERQLASANARIGVAKGAFFPVLTLTGSGGYLSGDVEDLFNWNSRTWSIGPSVSLPIFAGGRNRSNLERARSVYDESVALYRQQVLVAFGDVEDSLSAIRHLADQAEAQSRAVTSAKRAASLAEDRYRSGIVAYIEVVDANRDELSAERANAQLAGERLIATVQLIKALGGGWNENDSVASISPAAEPRSK*