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berkeley_reactor_200306_planktonic_scaffold_112900_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 11210..11626

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 139.0
  • Bit_score: 159
  • Evalue 1.30e-36
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EEF59645.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 139.0
  • Bit_score: 159
  • Evalue 1.90e-36
biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 124.0
  • Bit_score: 94
  • Evalue 2.50e-17

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 417
ATGCGGCGCTTTTCCCAACGCAGTCATCTGGTCACGCTGAGTGAAATCAACATCACTCCGCTGCTGGACCTTGCGTTCGTGCTGCTCATCATTTTCATCATCACCACGCCGCTGCTGGAACAAAGCATTGATTTGAAACTGCCGCAGGGCGGGAAGCCGGAACAGCGGCTGAACAAATCGGATATCCGCACCGTGGAAGTTTCCACCGCCGGCGATTACGCGCTCGACCGGCGCCGGCTGGCGCTGGACCAGATTATTTACCAACTCGCCACGGACTTTCGTTCCAATCCCAACATGGTGGTGTATATTCGGGCGGACAAGGATTGCCGCTACGATTACGTGGCCCAGTTGCTGAACGGCTGCCAGCGTTATGGCATCAGCCGTTATTCGTTGCGCACCGACCCGACGACCAGATGA
PROTEIN sequence
Length: 139
MRRFSQRSHLVTLSEINITPLLDLAFVLLIIFIITTPLLEQSIDLKLPQGGKPEQRLNKSDIRTVEVSTAGDYALDRRRLALDQIIYQLATDFRSNPNMVVYIRADKDCRYDYVAQLLNGCQRYGISRYSLRTDPTTR*