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berkeley_reactor_200306_planktonic_scaffold_112900_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 12543..13718

Top 3 Functional Annotations

Value Algorithm Source
WD40 domain protein beta Propeller n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKH3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 396.0
  • Bit_score: 359
  • Evalue 4.20e-96
WD40 domain protein beta Propeller {ECO:0000313|EMBL:EEF59643.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 396.0
  • Bit_score: 359
  • Evalue 5.90e-96
tolB; Periplasmic component of the Tol biopolymer transport system similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 359.0
  • Bit_score: 189
  • Evalue 9.60e-46

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1176
ATGAAAAACGCCATCACCCATCTTTTAATTGTCGGCCTCGCCAGCGTCGCCCTCCTGGGCGCGCGTGCGCAGGAAATCACCGTTGGCAAGGAAATCAATGTCCTCGGCCTGACCAAACCCATTCCCGTGGCGTTGAGCGGGTTCACCGGGGTGGGCGCGGAAGTTTTGCGGTTTGACCTGACGGTGCAGGGTTTCAGTTTCGTGGCGCCGGAGGCGGCGCAATACCTCATCAGCGGCACCGATGCCGGCAGCATCGCCGGCAGCCTGACTGACAAGGTGGCGAATCGCTCGCTTTTTTCGCGCACTTACAGCGGCGGCAGCCTGCGTCGCCAGGCCCATGCGCTGGCGGACGACATCGTGCAGGCGGTGACCGGCAGGAAAGGCATCGGGCAGACCAAAATCGCGTTCAAATGCCAGCCCACCGGCTATGGCGCGGGGGAAATTTATGTGTCGGATTTTGACGGCGACAACGCGCAGGCCGTGACGTCGGACAAAGCCATTGTGGCCAAGCCCGCCTGGGTGCCGGGCAGGCTGGCGTTGTATTACACCTCTTACGCGCGCGGTAATCCGGATATTTTTTATCACGATTTGTCGAACGGCCAGCGCCGGATCATCGCGGGTTATTCCGGGTTGAACACGAGCGCCGCCGTTTCGCCGGACGGCTCCAAGATTGCGATGGTGCTGGACAAGACCGGCACGGTGAACATCTGGGTTTGCGACGCGGACGGATCCCATTTGAAACGCATCACCCAGGGCGTGGAGGATTCTTCGCCAACCTGGTCGCCGGACGGCCAATGGATTTGCTTCGCCACCAAGGAGAATTCCCGTCGGCGTCTGGCCAAGGTGGCCTCGACCGGCGGCGCGCTGCATTACATCAACACCGCCGGGGTGGCGAATCCTTCGGAGCCGGACTGGTCGCCGGACGGCAAGTGGATTGCGTTCACGTCGCAGATGGGCAATTTCAACATCTGCGTGGTGCCGGCGGACAGCAGCCAGCCGCCGTCCATTCTGGTCAGCGGACAGAACCCGTCCTGGGCGCCGAATTCGCGCACGCTGGCTTACAACCATTCCGTCGGCTATCGCGAAGTGCTGTCTGTGCTTGACGTTTTCACCAAACAATACAAGGATTGCAAGCGGGTGCCGGGAAGCAGCTCCCAACCGGCTTGGGCGAGATAA
PROTEIN sequence
Length: 392
MKNAITHLLIVGLASVALLGARAQEITVGKEINVLGLTKPIPVALSGFTGVGAEVLRFDLTVQGFSFVAPEAAQYLISGTDAGSIAGSLTDKVANRSLFSRTYSGGSLRRQAHALADDIVQAVTGRKGIGQTKIAFKCQPTGYGAGEIYVSDFDGDNAQAVTSDKAIVAKPAWVPGRLALYYTSYARGNPDIFYHDLSNGQRRIIAGYSGLNTSAAVSPDGSKIAMVLDKTGTVNIWVCDADGSHLKRITQGVEDSSPTWSPDGQWICFATKENSRRRLAKVASTGGALHYINTAGVANPSEPDWSPDGKWIAFTSQMGNFNICVVPADSSQPPSILVSGQNPSWAPNSRTLAYNHSVGYREVLSVLDVFTKQYKDCKRVPGSSSQPAWAR*