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berkeley_reactor_200306_planktonic_scaffold_112900_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 16460..17332

Top 3 Functional Annotations

Value Algorithm Source
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 288.0
  • Bit_score: 379
  • Evalue 3.10e-102
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 283.0
  • Bit_score: 199
  • Evalue 6.90e-49
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 288.0
  • Bit_score: 379
  • Evalue 2.20e-102

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 873
ATGACCCTGGAAAAAAAATCCCCCTGCAAGGTCAATCTCATCCTCAACATTCTTGGCCGGCGCGCCGACGGTTTTCACGAGCTCGAAACCCTCATGCAGCCGGTCAATGTCTGTGATGAAATCCGCTTTGAACGCGCCGGCTCGGGCCTGCAGCTTTCGTGCAGCCAGCCGGAGCTGCCGGTGGATGCCGGGAATCTGGTGCATCGCGCCGCGACTTCCTTTCTGGCCGCCGCGAACATTGCCGACGGTGTCCGCATTCATCTGCACAAAAATTTGCCGCTGGCCGGCGGCATCGGGGGCGGCAGCGCCAATGCGGCGGTTACGCTCACGGCGTTAAACGAACTGTTCGGCCGGCCGCTGCCGCCGGAGAAACTGCACGCTTTGGCGGCGGCGCTGGGCTCGGACGTTCCGTTCTTTCTTTACGACCGGCCGGCCCTGGCCACCGGCCGCGGTGAAAACGTGGCATTGCTGGAACACTTTTCCGCCTTGCAGGGCCGGGCGTTTTTTTTGGTTCATCCCGGCTTTGGCATCTCCACGCCCTGGTCCTATCAAAACCTGGCCCGGTTTCCGGCGGCATTGAACGGACGACCGGGGCGCGCGGAAAAACTCAGCCGGCTCCTGCAAGCCGGCGATTTGGAAAGCGCCCGCGCGGAAATCTACAATTCCCTCGAAGCGCCGGCGTTCGAGAAATTTCCCGTGCTGCAGCTTTACCAGGAATTCCTCCGCGAAAACGGCGCGCTGGTTTCGCTGATGTCCGGCAGCGGCTCCACGACCTTTGCCATCGCGGAAAATCTGAACGCGGCGGAGACGCTGGCGGAGAAATTTAAATCCCAATTCGGCGACACCGGCTGGATGGCAACCGTGGCGATTTGA
PROTEIN sequence
Length: 291
MTLEKKSPCKVNLILNILGRRADGFHELETLMQPVNVCDEIRFERAGSGLQLSCSQPELPVDAGNLVHRAATSFLAAANIADGVRIHLHKNLPLAGGIGGGSANAAVTLTALNELFGRPLPPEKLHALAAALGSDVPFFLYDRPALATGRGENVALLEHFSALQGRAFFLVHPGFGISTPWSYQNLARFPAALNGRPGRAEKLSRLLQAGDLESARAEIYNSLEAPAFEKFPVLQLYQEFLRENGALVSLMSGSGSTTFAIAENLNAAETLAEKFKSQFGDTGWMATVAI*