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berkeley_reactor_200306_planktonic_scaffold_112900_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20697..21986

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 429.0
  • Bit_score: 655
  • Evalue 4.40e-185
tyrosyl-tRNA synthase (EC:6.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 437.0
  • Bit_score: 577
  • Evalue 3.10e-162
Tyrosine--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHF6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 429.0
  • Bit_score: 655
  • Evalue 3.10e-185

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1290
GTGAACATTCTGGATGAATTACAATGGCGCGGCCTGGTGGCCGACTGCACGGACACGGCAGAATTGACGAAAAAACTCGCGGCGCCCATTACGCTTTATTGCGGCTTTGATCCCACGGCGGATTCGCTGCATGTTGGCCATCTGGTGCCGCTGCTGGCGCTGCGACGCTTCCAGGATTTCGGCCATCATCCCATTGCCGTGGCCGGCGGCGCCACCGGTTCAATCGGTGATCCCAGCGGCAAATCCGCCGAGCGCTCGCTGCTGACCAAGGAACAGATCAAGGCCAACGTCGAATCGGTGCGGCCACAGCTGGCGCGGTTTCTGGAATTTGACGCCGCCAAAACCAAAAATCACAATCCCGCCAAGCTGATGGACAACGCCGATTGGACGGCGGGGTTGAGTTACTTGGATTTTTTACGCGACATTGGCAAGCATTTTTCCGTGAACCAGATGATCGCCAAGGAATCCGTGCGCGCCCGCATGGAGGACCGCGAGGTGGGCATCAGCTATACCGAGTTCAGCTACATGCTGCTCCAGGCGTTGGATTTTTACGTGCTGGCCCGTGACCACGGTTGCGAATTGCAAATCGGCGGCAGCGATCAATGGGGCAACATTACCGCCGGCATAGACCTGATGCGCAAAAAGCTCGGCAAGCAAGGTTACGGTTTGACCCTGCCGCTCATCACGAAGGCCGACGGCACCAAGTTTGGCAAGACCGAAGGTGGCTCGGTGTGGCTCGATCCCAAGAAGACGAGCGTTTACAAGTTCTACCAATTCTGGATCAACTCCGCCGATGCGGATGTCATCCGTTATCTGAAATTCTTCACGTTCCTGCCCAAGGAAGAGATTGAGGTGCTGGAAAAGAAACACGCGGAAAATCCCGGCGCCCGCGAGGCGCACAAGGCGCTGGCGAAGGCCGTGACCGATTTGATTCACGGCGAAAACGCCACGCAGGAAGCCGTCCGCGCCAGCCAGATTTTGTTTGGCGGCGAACTGGCGGGCGTTTCCGAATCCACGTTCAACGACATCGTCGGCGAAGTGCCAACGAAGGAAATCGAAAAGGCCAAGCTCGACGGTGCGGGCATTCCGCTCGTTGAAATGCTGATTCACGCCGGGCTGTGCCCGTCAAAAGGTCAGGCCCGCAAAGACATCGAAGGCGGCGGCGTGAACATTAACAATGTCCGTGAAGCCAAGGCTGATCGGGCCGTGACGCCAGCCGATTTGCTGTTTGGCAAACACATCCTCCTGCGCAAAGGCAAAAAGAATTACGTCGTGGTAACGGCGAAGTGA
PROTEIN sequence
Length: 430
VNILDELQWRGLVADCTDTAELTKKLAAPITLYCGFDPTADSLHVGHLVPLLALRRFQDFGHHPIAVAGGATGSIGDPSGKSAERSLLTKEQIKANVESVRPQLARFLEFDAAKTKNHNPAKLMDNADWTAGLSYLDFLRDIGKHFSVNQMIAKESVRARMEDREVGISYTEFSYMLLQALDFYVLARDHGCELQIGGSDQWGNITAGIDLMRKKLGKQGYGLTLPLITKADGTKFGKTEGGSVWLDPKKTSVYKFYQFWINSADADVIRYLKFFTFLPKEEIEVLEKKHAENPGAREAHKALAKAVTDLIHGENATQEAVRASQILFGGELAGVSESTFNDIVGEVPTKEIEKAKLDGAGIPLVEMLIHAGLCPSKGQARKDIEGGGVNINNVREAKADRAVTPADLLFGKHILLRKGKKNYVVVTAK*