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berkeley_reactor_200306_planktonic_scaffold_112900_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(22907..23125)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-1 n=1 Tax=mine drainage metagenome RepID=T1AD35_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 70.0
  • Bit_score: 105
  • Evalue 2.00e-20
translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 70.0
  • Bit_score: 102
  • Evalue 3.70e-20
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_43_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 71.0
  • Bit_score: 106
  • Evalue 9.70e-21

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Taxonomy

R_Gammaproteobacteria_43_28 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
GTGGCCGGAGAAGAACCCATCGAACTGACTGGAACCGTCGCCCAGGTGCTGCCCGGCACCATGTTTCGGGTCGCCCTCGCCAACGGTCACATCGTGCTGGCCCACATCTCCGGCAAGATGCGCAAAAATTACATCCGCATTTCCGTCGGCGACAAGGTCAACGTGGCAATGTCCCCCTACGACCTCAACAAAGCCCGCATCACCTACCGGCATCCCTGA
PROTEIN sequence
Length: 73
VAGEEPIELTGTVAQVLPGTMFRVALANGHIVLAHISGKMRKNYIRISVGDKVNVAMSPYDLNKARITYRHP*