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berkeley_reactor_200306_planktonic_scaffold_128857_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 16963..17727

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSS8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 254.0
  • Bit_score: 382
  • Evalue 2.30e-103
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:EEF57095.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 254.0
  • Bit_score: 382
  • Evalue 3.20e-103
NCAIR mutase-like protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 253.0
  • Bit_score: 286
  • Evalue 4.90e-75

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 765
ATGACGACGACTGAAGCCGTTCAACTGCTGGAAAAATTCCGCGCGGGAAAAATCTCCGGCAAAAAAACCCTGCAGGCATTTCAAGCCGCACCTGTTGCCGATCTCGGTTTTGCCCAGGTGGACACGCACCGCGCGCTGCGAAAAAATTTTCCCGAAGTCATTTTCGGCGCCGGCAAAACTCCGGAACAAGTTGTCAAAATCGCGGCCAAAATTTTGCAGCATTCGCGCCAGGTGCTGGTCACGCGCATTGCCGCCGAACATGCGCGGGCCCTGCGCAAACGGTTCAAACACGCGGTTCACCACCAGGGCGCCCGTTGCGTGACCATTGAGAAAACCCCCTTTCCCCAACGCCCCGGGTTCATCGCGATCGTTTGCGCGGGAACGAGCGACCTGCCCGTGGCGGAAGAGGCGGCGGTCACGGCGGAGATCATGGGCAACCGCGTGGAGCGGATTTTTGACGTGGGCGTGTCCGGGCTGCACCGGATGCTGGCGCGCCTGGACATTTTGCAACAGGCCAACGTGCTGGTCGTGGTCGCGGGGATGGAGGGCGCGCTGCCGAGCGTCGTGGCGGGACTCGTTGCCCGCCCGGTGATCGCGGTGCCGACCAGCATTGGCTACGGCGCCAATCTGGGCGGCCTGACCGCCTTGCTCGCAATGCTCAACAGTTGCGCGAGCGGCCTGACCGTGGTGAACATAGACAACGGATTCGGCGCCGGCTACGCCGCCAGCCAGATCAACGCCCTGGCTTCAGCTTCCGAAAAATGA
PROTEIN sequence
Length: 255
MTTTEAVQLLEKFRAGKISGKKTLQAFQAAPVADLGFAQVDTHRALRKNFPEVIFGAGKTPEQVVKIAAKILQHSRQVLVTRIAAEHARALRKRFKHAVHHQGARCVTIEKTPFPQRPGFIAIVCAGTSDLPVAEEAAVTAEIMGNRVERIFDVGVSGLHRMLARLDILQQANVLVVVAGMEGALPSVVAGLVARPVIAVPTSIGYGANLGGLTALLAMLNSCASGLTVVNIDNGFGAGYAASQINALASASEK*