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berkeley_reactor_200306_planktonic_scaffold_128857_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(21178..22413)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 409.0
  • Bit_score: 627
  • Evalue 1.20e-176
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG78_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 409.0
  • Bit_score: 627
  • Evalue 8.70e-177
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 411.0
  • Bit_score: 513
  • Evalue 5.20e-143

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1236
ATGTCAAAGGAACTGACCGCACCCCAGAAGAAGATCAATCTCCGGCGGCCCGACATCATGGAAGCCGTTTCCGCCCAGGTTTTGTCCCATTACCGGAGCGAACTTGTCGAAAACATCCGCGCCAATGGCGGCGTGCTGTCCGCGGACGGATTGACGGTGAAGCTGGCGAAGGAATTCGGCTTTTGTTACGGCGTCGAACGCGCCATTGATCTCGCCTACGCGGCGCAAAATTATTTTTCGGAAGTGTCGCCGAACACCCCGATTTATCTGCTCGGAGAAATCATTCACAATCCCGAAGTGAACGACCAGATCCGCAACATGGGCATTCAGATCATTTCGCCCAAGCCCACCGATGAGGAGATGGAACGCCTGCAATCCGGTGATGCCGTGATCATCCCCGCGTTCGGCACCGAAGTCAGCACCCGCAAAAAACTCGAGGCCAAAGGCTGCATTCTGGTGGACACCACCTGCGGCGACGTGATGAGCGTCTGGAAACGCGTCCGGCAATACTCCAAGGAACACGTCACCAGCATCATCCACGGCAAGGCCAAACACGAGGAAACCAAGGCGACCACCTCCCAGGCGCGCGCCTACGGCAGCGGCCATTATCTCGTCGTCTATAATCTCGACGAAACGGATTACGTCTGTCATTACATTTTGCACGGCGGCGACAAGGACGCGTTTCTCAAAAAATTTGAAGGCGCCTACTCCGCCGGATTCGATCCCGACCTGCATTTGCAGGCCATCGGCGTGGCGAATCAAACCACCATGTTGCGCGGCGAAACGGAGGAGGTGCAGCGCCGGTTCCGGACGGCCATGGAAAAAAAATATGGCCCGGAAAAAATCGCCGACCATTTTCGCTTCTTTGACACCATCTGCGGCGCCACGCAGGATCGCCAGGACGCGCTGGAAAAAATGCTGCTCACGCCGCCCGATCTGTTGATCGTCATCGGCGGCTACAATTCCTCCAACACCTCGCATCTGGCGGAGATGGGCGAAGCCAAGCTGCCCACCTATTTCATCAAAAATGCCGCCAAGATGGAATCGGCGTCGCTCATCCGGCATTACAACCAGCACCAAAAGGAGGAGGTGGAAACCCGCGACTGGCTGCCCGCCGGCAACATCACCGTGGGGGTCACCGCCGGCGCGAGCTGCCCGAACAATTTGATCGAAGACACCATCCGCCGCCTTTTTCAACTCCGCGGGATCTCGGTCCAGGAGCTGCTGAAAAAATAG
PROTEIN sequence
Length: 412
MSKELTAPQKKINLRRPDIMEAVSAQVLSHYRSELVENIRANGGVLSADGLTVKLAKEFGFCYGVERAIDLAYAAQNYFSEVSPNTPIYLLGEIIHNPEVNDQIRNMGIQIISPKPTDEEMERLQSGDAVIIPAFGTEVSTRKKLEAKGCILVDTTCGDVMSVWKRVRQYSKEHVTSIIHGKAKHEETKATTSQARAYGSGHYLVVYNLDETDYVCHYILHGGDKDAFLKKFEGAYSAGFDPDLHLQAIGVANQTTMLRGETEEVQRRFRTAMEKKYGPEKIADHFRFFDTICGATQDRQDALEKMLLTPPDLLIVIGGYNSSNTSHLAEMGEAKLPTYFIKNAAKMESASLIRHYNQHQKEEVETRDWLPAGNITVGVTAGASCPNNLIEDTIRRLFQLRGISVQELLKK*