ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_128857_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 36000..37025

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRD0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 335.0
  • Bit_score: 325
  • Evalue 5.90e-86
Integrase family protein {ECO:0000313|EMBL:EEF57617.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 335.0
  • Bit_score: 325
  • Evalue 8.20e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1026
ATGCACATGAAAACCAAATACACCCTGTTCCGGCGCGGTGACGTATTCTATACCCAAGACAGCGCGACCGGCAAGCAAACGAGTCTCCGCACCAAGGACGAGACCGAGGCCCGCAGCCTGCTCAACGCCAAGAACGAAGCCCAACGCCAGCCGGTGCTAAACCTGCATCTGGCCCGCGCCTACCTGACGGCCAGCGACCCCGCCTTTGTGGCCCGCACCTGGCAGACTGTCATGGAGCAGTTGCAATCACGCGGCAAGGACAGCAGCCGCGAGCGTTATGCCAGCGTGTTCAAATCATCCGCCTTTGACGGACTACGGCACAAGAAGTTGCTGGAAACCACCGCCGATGATTTCTTTGCCGTGTTCAAAGACGGCAAAGTTTCCATCGTCTATTTCTTGAAACGGCTCCACAACTTCGCCTTGAGCTTGGGCTGGATTGCCATCCCCATCGTTGCGCCGTATCTCTGGCCGAAATACGAACCCAAAGACCGGCGCGGCATCACGCAGGACGAACACCAAAGTCTTTTGGCGAAGGAGAAACACGCGGAATGGAAACTGTTTCTGGAACTGCTTTGGGAAACGGGCGCGGCGCAGAGCGACGCGGCGAATTTCACGGCGGAGGACATTGACTGGCAGACGCGGACGATTTCCTATTTCCGGCAAAAGACCGGCTCGCTGGCCCAGTTCACCATCAGCAAGGCGCTGGAAACGGTGTTGAGCCATTTGCCGACGACTGGTCCGCTGTTTCCAAATCTGTCCCAATGGTCAGAAAGTGACCGGGGCAGCCGCTTTCGCCGGCGTTGCGAACGGGCCGGCGTGTCGGGCGTGACGCTGCATTGTTACCGCTACGCATGGGCGGAACGGGCCAAGGTTGTCGGAATGCCGGAACGGTTCGCGCAGGCCGCGCTGGGTCACAACAGCAAGGCGATTCATCACGCCTATGCGAAAAAGGCCGTCATCATTGCGCCATCACTTGAAGACTACGAAGCGAAGGCGGCGACGATGACGCCGACAGTGATGGTCTGA
PROTEIN sequence
Length: 342
MHMKTKYTLFRRGDVFYTQDSATGKQTSLRTKDETEARSLLNAKNEAQRQPVLNLHLARAYLTASDPAFVARTWQTVMEQLQSRGKDSSRERYASVFKSSAFDGLRHKKLLETTADDFFAVFKDGKVSIVYFLKRLHNFALSLGWIAIPIVAPYLWPKYEPKDRRGITQDEHQSLLAKEKHAEWKLFLELLWETGAAQSDAANFTAEDIDWQTRTISYFRQKTGSLAQFTISKALETVLSHLPTTGPLFPNLSQWSESDRGSRFRRRCERAGVSGVTLHCYRYAWAERAKVVGMPERFAQAALGHNSKAIHHAYAKKAVIIAPSLEDYEAKAATMTPTVMV*