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berkeley_reactor_200306_planktonic_scaffold_162563_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20368..21147

Top 3 Functional Annotations

Value Algorithm Source
RDD domain containing protein id=4623570 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 252.0
  • Bit_score: 341
  • Evalue 6.00e-91
RDD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 252.0
  • Bit_score: 288
  • Evalue 1.70e-75
Tax=GWC2_Nitrospirae_42_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 252.0
  • Bit_score: 341
  • Evalue 8.40e-91

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Taxonomy

GWC2_Nitrospirae_42_7_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 780
ATGAACCCTTCTTCGCGCACCAGCACGCTGACGATTCGCACGCCGGAAGGGGTGGTGTTTGCATTGCAATTGGCCAGCCCGGTCACGCGTTTCCTGGCGTGGGCGATAGATTTTGCATGCATTTCGGCGGCGTGTTCCATCCTTGGCACAGCGCTGGGTTTGTTGGATTTGATCAGCCTGGACCTCACCCGGGCAGTCATCATCCTGCTGTTCTTCGCGCTGCAAATTGGATACGGCCTGGTGTTTGAATGGTTCTGGCGTGGGCAGACGGTTGGCAAGCGGCTGTTGCGATTGCGGGTGGTGGATGCCGGCGGATTGCGGCTTCAGTTCAGCCAGATTGTCATTCGCAACCTGCTGCGTTTTGTGGACATGCTGCCCGCATTTTATCTGGTTGGCGGCATCACCACGCTGCTCAACGCGCACACGCAGCGCCTTGGCGACATTGCGGCCAGCACGGTGGTCATTCGTTCGCCGAAAATCGAGCAGCCCGACCTCGGCCAAATTCTCGCCGGTAAATTTAATTCGCTCCGCGCGCATCCGCATCTGGAAGCGCGATTGCGACAGCGTATTTCGCCGGTGGAAGCCAGCCTGGCATTGCAGGCTGTGCTGCGGCGCGAAGAATTTGAACCCCGCGCCCGCGCCGAATTGTTCGCGCGACTGGGAGAACATTTCCGCTCGCTCGTCGAATTCCCGCCCGAGTCCGTCGAACATGTCACGGACGAACAATATCTGCGCAATGTCGTGGACACGGTTTACCGATCGCGACGGGTTGCGGGGTAA
PROTEIN sequence
Length: 260
MNPSSRTSTLTIRTPEGVVFALQLASPVTRFLAWAIDFACISAACSILGTALGLLDLISLDLTRAVIILLFFALQIGYGLVFEWFWRGQTVGKRLLRLRVVDAGGLRLQFSQIVIRNLLRFVDMLPAFYLVGGITTLLNAHTQRLGDIAASTVVIRSPKIEQPDLGQILAGKFNSLRAHPHLEARLRQRISPVEASLALQAVLRREEFEPRARAELFARLGEHFRSLVEFPPESVEHVTDEQYLRNVVDTVYRSRRVAG*