ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_162563_33

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 39830..40759

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK20_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 309.0
  • Bit_score: 508
  • Evalue 2.60e-141
Thiamine pyrophosphate protein domain protein TPP-binding {ECO:0000313|EMBL:EEF59843.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 309.0
  • Bit_score: 508
  • Evalue 3.60e-141
pyruvate ferredoxin oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 301.0
  • Bit_score: 371
  • Evalue 1.40e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 930
ATGAGTGAAACTTTAGCAGAAAAACCGGCCCCCAGTTCCACCACGCCGCCCGCCACGGAACGCAAGGGGTTGACCAAAAAGGAAATTGCCGCCGACCATCCGACCTGGTGTCCCGGCTGCGGTGATTTTTCCGTGCTCGCGCTTTATTTCAAGCTGATCGAAAAGCGCAAGATGTTGCACGAGAAAATCACCACCATTTCCGGCATCGGCTGCTCCAGCCGGTTCCCGTATTTTGTGCAGGCCCACGGCGCGCATTTTATTCACGGCCGCGCGCTGCCGTTTGCCAGCGGCATTTCCCTCTCGCGCCCCGACCTGCACGTCTTCGCCTTCAGCGGCGACGGCGATGCGTTTTCCATCGGCGGCAATCACTTCACGCACACCGCGCGCAAGAACATTAAAATGACGCTCGTCGTCATGGACAACCAGGTTTACGGCCTGACCAAGAAACAAACCTCGCCCACGTCGCCGCTCGGTTTCAAGAGCAAGACGGACCAATGGGGCGCGGTGGATTATCCCATCAATCCGGTCAAACAGGCCATCGCCGCCGGCGCCACGTTTGTCGCGCGCACCACGGCGTCGAACCCGAATCATGTTTTGCAAATGATGGAAGCCGCGATGGACCACGACGGTTTCAGCTTTGTGCATTGCCTGAGCGAATGCGTGGAATTTTACGATGGCGCGTTCGACGCGGCGAATCCCCGCAAAGGCGGTGTGTTCAACGAAGTTCCCAAGACGCACGACGTCACCGACGAGCTCGGCGCCTACAAGCTGGCCGGCGCGGAATTCCCCGGCAACTTCGGCGTTTTCTACCAGGTCAACAAGCCGACCAAGAACGCCCGGGAAGCCGAGATCAACCAATCCTATCAGAGCAAGTTCGCCGGTCTGAAGGACTGGCAGATTTTGCAGAAAAACTTCGACCGGATGAAATAA
PROTEIN sequence
Length: 310
MSETLAEKPAPSSTTPPATERKGLTKKEIAADHPTWCPGCGDFSVLALYFKLIEKRKMLHEKITTISGIGCSSRFPYFVQAHGAHFIHGRALPFASGISLSRPDLHVFAFSGDGDAFSIGGNHFTHTARKNIKMTLVVMDNQVYGLTKKQTSPTSPLGFKSKTDQWGAVDYPINPVKQAIAAGATFVARTTASNPNHVLQMMEAAMDHDGFSFVHCLSECVEFYDGAFDAANPRKGGVFNEVPKTHDVTDELGAYKLAGAEFPGNFGVFYQVNKPTKNAREAEINQSYQSKFAGLKDWQILQKNFDRMK*