ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_162563_36

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 41974..43167

Top 3 Functional Annotations

Value Algorithm Source
major facilitator superfamily protein id=12556402 bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 398.0
  • Bit_score: 372
  • Evalue 4.90e-100
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 410.0
  • Bit_score: 378
  • Evalue 7.30e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1194
ATGACGCATCGCCAGCTCAAGGCCGGTTATTTTGCGCTGGCGGGAATGAACACGCTGGCGACGTCGTATTATTTCAATTACCTGTTCTTTTTTCTGCGGGATGAGTTTGGCTTTGGCGATCGTGGCAATCTGTGGGTCATGGCGTTGTCGGGGTTCATTTACATTTTTGCCGCGTGGCAGTGCGGCCGGTTCGCGGCGCGGTGCGGGCGGGTGTTGAGCTTGAAAATCGGGTTTGCCGCGCTTTGCGCCGTGATGATCGGCGGCGGACTGGCAACGCACCGCATCGCGGCGCAACTGCTCCTGGTTTCCCTCTACAACATCGTGCTGCTGCTGACGTGGCCGGCGCTCGAATCGCTGGTCAGCGAACGCGAATCGCAGGCCGGCGTGCAGAAAATGGTGGGCGTTTACAATTGCACCTGGGCCGGGGCGGCGGCGCTGGCGTATTTCACCGGCGGCAAATTATACGATGCGCTCGGCGCGGGCGCGGTGTTCTGGCTGCCGGCGGGAATTTTTTTCGCGCAATGGCTGCTGCTGCTCTGGCTGGAAAAACATCACGATGCCGTGCTGGCGGCCACGCCGCAACCGCCGCCGGAACTTCATCCGGCGCCGGACACCGCGGCGCGCGGACAGCCGGTCAGCCCGCGCACATTTTTGAAGATGGCGTGGCTCGCCAATCCGTTCGCCTACGTGGCCATCAACACGCTGTTCGCCGTCATGCCGGGCGTCGCGGAAAAACTGGCGCTCTCGCCCACGCGCGTGGGATGGTTTTGCTCCGTCTGGCTGTTCGGTCGCCTGGCCGCGTTCGTGGTTTTGTGGCAATGGCGCGGCTGGCATTACCGGTTCCGGTGGCTGTTCGCGGCGTTTGTGGTGCTGATTGCCGGACTGGCGGCCATCCTGCTCGCGAGCCAGCTCTGGATTGTGGTGCTGGCGCAACTGTTCTTCGGTCTGGCCACGGGCGTGATTTATTATTCGTCGCTGTTTTACTCGATGGATGTGGGCGCGGCCAGCAGCGAGCACGGCGGGCTGCACGAGGCGTTCATCGGCATCGGCATCTGCATCGGGCCCGCGGCCGGGGCGGCGGCGCTGACGTTCCTGCCCGGAGTGGCCAACGCCGCCACCGTCGCGGTGTCGGGGTTGCTGGTATTCGGGCTGGGCGGGCTGCTGCGGCTGCGCTGGGCTGCCCCGAACGGGTGA
PROTEIN sequence
Length: 398
MTHRQLKAGYFALAGMNTLATSYYFNYLFFFLRDEFGFGDRGNLWVMALSGFIYIFAAWQCGRFAARCGRVLSLKIGFAALCAVMIGGGLATHRIAAQLLLVSLYNIVLLLTWPALESLVSERESQAGVQKMVGVYNCTWAGAAALAYFTGGKLYDALGAGAVFWLPAGIFFAQWLLLLWLEKHHDAVLAATPQPPPELHPAPDTAARGQPVSPRTFLKMAWLANPFAYVAINTLFAVMPGVAEKLALSPTRVGWFCSVWLFGRLAAFVVLWQWRGWHYRFRWLFAAFVVLIAGLAAILLASQLWIVVLAQLFFGLATGVIYYSSLFYSMDVGAASSEHGGLHEAFIGIGICIGPAAGAAALTFLPGVANAATVAVSGLLVFGLGGLLRLRWAAPNG*