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berkeley_reactor_200306_planktonic_scaffold_162563_43

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 49019..50038

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 43 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQQ1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 307.0
  • Bit_score: 547
  • Evalue 5.50e-153
Glycoside hydrolase family 43 {ECO:0000313|EMBL:EEF57833.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 307.0
  • Bit_score: 547
  • Evalue 7.80e-153
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 294.0
  • Bit_score: 486
  • Evalue 3.30e-135

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1020
ATGATTCGGTCATTTAAAAACTTCCCGTATGTGTTTTGGAGTGTTCAGATTTGCATCGGCCTGCTGTTCGGCCCGGCCGTTGTTCCGGCGGAAACGACGGTCACCAACTCACTGCGCTCCGGCAATCCAATTTTTCCGGGCTGGTATGCCGATCCCGAGGCGAAAGTCTTTGGCCAGGAATACTGGATTTATCCCACCTATTCCGCGCCTTACGACGAGCAGACTTTCTTCGACGCGTTTTCGTCGCCGGACCTGGTGCATTGGACCAAGCATCCGCATGTTTTCGGCACCAATGAAATCACGTGGGCGCACCGCGCGATGTGGGCGCCGGCGGTGACGGAAAACCGCGGGCGTTATTTTTTCTTTTTTGCCGCCAACGACATTCAGAACGACCACCAAGTCGGCGGCCTGGGCGTGGCGGTGGCCGATCAACCCGGCGGGCCATTCAAAGATTATTTGGGCAAGCCGCTGATTGATAAATTTCACAATGGCGCGCAGCCGATTGATCCGTTTGTGTTTCGTGACCAGGATGGCCAATTCTATCTGATTTACGGCGGCTGGCGGCATTGCAATATCTGCCGGTTGAAAAGCGATTTCACCGGCGTCGAGCCGTTTGCCGACGGCACCACGTTCAAGGAAATCACGCCCCAAGGTTATGTCGAAGGCTCGGTGATGTTCCGGCGTGGCGACAAATATTATTTCATGTGGTCGGAAGGCGGCTGGACCGGGCCGGATTATTCCGTGGCGTATGCCATTGGCGATGCGCCGACCGGACCGTTCAAGCGCATTGGCAAAATTCTCCAGCAGGATCCCAAGGTCGCCACGGGCGCGGGTCATCATTCCGTGATTCACGTTCCCGGCACGGAGCAGTATTACGTCGTTTACCATCGCCGGCCGCTGGGTGAAACCGACGGCAACCATCGCGTGACCTGCATTGACCGCATGAAGTTTGACGATCACGGTTTCATCCAGCCGGTGAAAATCACGTTCACCGGCGTGGCGCCGGCGCCGGTGCCGTGA
PROTEIN sequence
Length: 340
MIRSFKNFPYVFWSVQICIGLLFGPAVVPAETTVTNSLRSGNPIFPGWYADPEAKVFGQEYWIYPTYSAPYDEQTFFDAFSSPDLVHWTKHPHVFGTNEITWAHRAMWAPAVTENRGRYFFFFAANDIQNDHQVGGLGVAVADQPGGPFKDYLGKPLIDKFHNGAQPIDPFVFRDQDGQFYLIYGGWRHCNICRLKSDFTGVEPFADGTTFKEITPQGYVEGSVMFRRGDKYYFMWSEGGWTGPDYSVAYAIGDAPTGPFKRIGKILQQDPKVATGAGHHSVIHVPGTEQYYVVYHRRPLGETDGNHRVTCIDRMKFDDHGFIQPVKITFTGVAPAPVP*