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berkeley_reactor_200306_planktonic_scaffold_162563_51

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(56938..60636)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 1231.0
  • Bit_score: 1805
  • Evalue 0.0
DNA polymerase III, alpha subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPL1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 1231.0
  • Bit_score: 1805
  • Evalue 0.0
DNA polymerase III subunit alpha similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 1248.0
  • Bit_score: 1006
  • Evalue 4.50e-291

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3699
ATGTCGCATGCTGACTTTGTCCATTTGCACCTCCACACCGAGTATTCGCTGCTGGATGGTGCCTGTCGTTTGGACAAGTTGATTGAAAAGGCCCACGAACTGAAATTCCCCGCGCTGGCCATCACCGATCACGGCGCGATGTATGGCGCGGTGGAATTTTACCAGGCCGCCCGCGCCAAGGGCATCAAGCCCATCATCGGCTGCGAAGTTTATGTGGCGCCCGGTTCGCGCCTCGAAAAGAAACAGGGCAGCGGCATGCGCGACGTGTATCATCACCTCGGCCTGCTGGCGAAGGATGAAACCGGCTATAAAAATTTGGTGAAGCTCGTCACCGACGCGCACATTGACGGCTATTACTACAAGCCGCGCATTGACAAGGAAATCCTGGCCAGGCACAGCGAAGGCTTGATCGCCTTGTCCGGCTGTCTGGCGAGCGAGCTTTCCGATTTGATCGTGAAAGATCAGATCCAGAAAGCGAAGGACACGGTTGATTTCTTCAGGCAGACACTCGGCGCGGAAAATTACTTTCTCGAACTGCAAAACCACGGCATTCCGGAGCAGGCCAAGGTCAACAAGCAGTTGATTCAATTCGCCAGGGAATTCGGCCTGAAGCTCGTTGCGACGAATGACGTGCATTACATCGAGAAAGGCCACTCGCACGCGCACGATTGTCTCGTCTGCATCGGCACGCAGGATTTGTTGAGCAATCCCAAGCGCATGGGCGCGGGTTACGTGCCGGAGCAGTTTTACCTGCGCAGCGCCGAGGAAATGAAGGCGCGTTTCGCCGAAGTGCCGGAAGCGGTGACCAACACGCTGGAGGTGGCCGAGAAATGCAATTTGGAAATCAAGTTCGGCGAACTGCATTATCCCAAGTTCATTCCGCCGGAACACATGACGCCGGAAGGCTGCCTGCGACAACAGCTCGCGGAAGGGTTGTTTCGCCGCTACACGATTCACGCCGAAGCCAAGGGGGAAGAGTTTTCCATCACCGGCGTTGACGATCCGACGCGGCTGCCGACGTATAAAAATCCAGCAGGAGCCGACGTGGGGAGTCTCCATTCAACTCCAAAAAAGTCAGAGCCTCCTCACGTCGGCTCCTACGATGTGAATGATCCGGCCATTGCCGCCGCCATCCAAGCGGTCATTGACCGGCTGCAACTCGAACTCAAAGTCATCGAGAAAACGGGGTTCATTGATTACTTCCTCATCGTCGCCGATTTCATCCGGCACGGGCGCGAGAAGGGGATTGCCTGCGTGGCGCGCGGCAGCGCCGCCGGCTCGATCGTCACCTATCTGCTCGAAATCGCGAACGTGGACCCGATTCGCTACGGCTTGCTGTTCGAGCGGTTTCTGAATCCCGAACGCGTCAATCCGCCGGATATTGACATTGATTTCGCCGACGACCGCCGGGCGGACGTCATCGAATACGTCCGCGAAAAATACGGCAAGGACGCCGTCGCGCAGATCATCACGTTCGGCACGATGGGCGCCAAATCCGTGGTGCGCGACGTCGGCCGCGTGATGGGCCTGAGCTACGGCGAATGCGACCGGCTGGCGAAATTGATTCCGGCCGAGTTGAAGATGACGCTGGAAAAAGCGCTCAAGCAGGTGCCGGAACTCAAGGAAGCCTACGAAAACGAGGAAGTCACGCACGAACTGATTGACACGGCGTTCGTGCTGGAAGATTTGGCGCGCAATTCCAGCGTGCATGCGGCGGGTGTCGTCATCGGGCCGGAACCGCTGGTGAATTTGCTGCCGCTCAAGCAGGACGAAAGCGGCACGCTCGTCACGCAATACGCGATGGGCCCGGTCGGTGAACTCGGCCTGTTAAAGATGGATTTTCTGGGGCTGAAAACGCTGACGGTCATTCGCAACACCTGTGAAATGGTGAGGCAGACCCACGGCGTGACGATTGACATTGACCGGTTGCCGCTGGACGACAAAAAAACTTACGACCTGCTGAATCGCGCGGAAACGCTGGGCGTGTTCCAATTGGAATCCGGCGGCATGCGCGACCTGTGCAAAAAATTTCAGATCAGTTCCGTGGAGCATATCACCGCGCTCGTGGCGTTGTATCGTCCGGGGCCGATGGACCTGATTCCCGATTTCATCAAGCGGCGGCACGGCGAAATCGCGATTGAATACGCGCATCCGCTGCTCGAAAGCATTTCCAAGGAGACCTACGGCATTCTCATCTACCAGGAACAGGTGATGCAAGCCGCGCAGATTCTCGCCGGCTACACGCTGGGCGGCGCCGATTTGCTGCGGCGGGCGATGGGCAAGAAGAAGGTCGAGGAAATGCAGAAGCAGCGCGAGAAGTTCGTCAAGGGTGCGAAGGAGCATCACAACATCGCGCCGACCAAGGCGAACCAGATTTTCGATTTGCTGGAAAAGTTCGCCGGTTACGGCTTCAACAAATCGCACGCCGCCGCCTACGCCGTCGTCGCGTATCAAACCGCGTATCTCAAGGCGAATTATCCGGTGGAATTTTACTGCGCCATGATGACGAACGACATGGCGGCCACGGAAAAACTGAGCGAATACATCGCCGAAGCGCGCGAGGTGGGCATCGAGGTGCTCGGCCCGGACGTGAACGAAAGCCAGATGTTTTTTGCGCCGGCGCAGGAAGGCAAAACCATCCGCTTCGGCATGGCGGCCATCAAGGGCGTGGGTGAAAATGCAGTGCAAGCGATTTTAAAAGCGCACGACGCACATGGAAATTTTAAATCGCTCGCCGAACTTTGCGAGCAAGTGGACAGCCGGGCGGTCACGCGCAAAACATTGGAGGCACTTATCAAGACCGGCGCGTGCGATTCCTTCAAACAGACACGCGCCACGCTGTTTGCGCAAATCGAGCGTGCGCTGGCGCGGGCTTCCAGTATCCAGTCCGACAAACAAAAAGGCCAAAGCTCGCTGTTCGGCGCGCTGGAGGAAAAATCGTCCAGCGCCATGCCGGAAACGCTGACCAACCTGCCCGAATGGCCGCAGCATGAATTGCTCGCCCATGAAAAGGAATTGCTCGGTTTCTACGTCACCGGCCATCCGCTGACGCCGCTGGCGCCGTTGCTGGAACGCTTTTCCCTGCACAAAACCTCGCAACTGGCGGAACTGCCGAACCGCAGCATGACGCGCATCGGTGGCATGATCGCGGCCGTTTCGCACGGCGTTTCCAAAAAATCCGGCAAGCCGTATTCCATGGTGACGCTGGAAGATTTGGACGGCTCGGTGCAGTTGCTGGTGATGAACGATTACGAAAAATTCCGGCCGCTGCTGGAGGCGAACAAGGCGATTCTGGTGGTCGGCGAAGTCAGCACGGGCGAGGACCGGCCCAAGATTTTCCCGCAGGACATCATGCCGCTGGAGGACGCGCCGAAGAAATACACGAAACAGGTTCACCTGCGCCTGGGCACCGCGCATTTGCAGCCGGAGGACATGGAACGCGTCCAGGAACTGGTGGGCGCGCACGCGGGCAAATGTCCGTTGTTTCTCTGCTTCATGCGGCCGGAAGGCGCGATGGTGTTTGTCGAAGCCCATGAACGTTTCGGCGTGACGCCGTCGCTCGAATTGGAACACGCGGCCAACCGGCTGTTTGGCGAGAAAACCTACTACGCCCGCGTGGATACCAGCTTGCCCGAGCGCCAGCGGCGCAGTTGGGAAAAGAAGAACGGAAAAACCGGCGGCAATAATTACAACGAATGA
PROTEIN sequence
Length: 1233
MSHADFVHLHLHTEYSLLDGACRLDKLIEKAHELKFPALAITDHGAMYGAVEFYQAARAKGIKPIIGCEVYVAPGSRLEKKQGSGMRDVYHHLGLLAKDETGYKNLVKLVTDAHIDGYYYKPRIDKEILARHSEGLIALSGCLASELSDLIVKDQIQKAKDTVDFFRQTLGAENYFLELQNHGIPEQAKVNKQLIQFAREFGLKLVATNDVHYIEKGHSHAHDCLVCIGTQDLLSNPKRMGAGYVPEQFYLRSAEEMKARFAEVPEAVTNTLEVAEKCNLEIKFGELHYPKFIPPEHMTPEGCLRQQLAEGLFRRYTIHAEAKGEEFSITGVDDPTRLPTYKNPAGADVGSLHSTPKKSEPPHVGSYDVNDPAIAAAIQAVIDRLQLELKVIEKTGFIDYFLIVADFIRHGREKGIACVARGSAAGSIVTYLLEIANVDPIRYGLLFERFLNPERVNPPDIDIDFADDRRADVIEYVREKYGKDAVAQIITFGTMGAKSVVRDVGRVMGLSYGECDRLAKLIPAELKMTLEKALKQVPELKEAYENEEVTHELIDTAFVLEDLARNSSVHAAGVVIGPEPLVNLLPLKQDESGTLVTQYAMGPVGELGLLKMDFLGLKTLTVIRNTCEMVRQTHGVTIDIDRLPLDDKKTYDLLNRAETLGVFQLESGGMRDLCKKFQISSVEHITALVALYRPGPMDLIPDFIKRRHGEIAIEYAHPLLESISKETYGILIYQEQVMQAAQILAGYTLGGADLLRRAMGKKKVEEMQKQREKFVKGAKEHHNIAPTKANQIFDLLEKFAGYGFNKSHAAAYAVVAYQTAYLKANYPVEFYCAMMTNDMAATEKLSEYIAEAREVGIEVLGPDVNESQMFFAPAQEGKTIRFGMAAIKGVGENAVQAILKAHDAHGNFKSLAELCEQVDSRAVTRKTLEALIKTGACDSFKQTRATLFAQIERALARASSIQSDKQKGQSSLFGALEEKSSSAMPETLTNLPEWPQHELLAHEKELLGFYVTGHPLTPLAPLLERFSLHKTSQLAELPNRSMTRIGGMIAAVSHGVSKKSGKPYSMVTLEDLDGSVQLLVMNDYEKFRPLLEANKAILVVGEVSTGEDRPKIFPQDIMPLEDAPKKYTKQVHLRLGTAHLQPEDMERVQELVGAHAGKCPLFLCFMRPEGAMVFVEAHERFGVTPSLELEHAANRLFGEKTYYARVDTSLPERQRRSWEKKNGKTGGNNYNE*