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berkeley_reactor_200306_planktonic_scaffold_162563_53

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(61782..63593)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type multidrug transport system, ATPase and permease component id=4049088 bin=GWF2_Lentisphaerae_57_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 598.0
  • Bit_score: 478
  • Evalue 7.30e-132
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 521.0
  • Bit_score: 416
  • Evalue 7.40e-114
Tax=GWF2_Lentisphaerae_57_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 598.0
  • Bit_score: 478
  • Evalue 1.00e-131

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Taxonomy

GWF2_Lentisphaerae_57_35_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1812
ATGATCGCTTTCCTGAACAAACTCTGGGAATTCGCCCGACCTTACCGCTGGCGCCTTTTTCTCGGCGTTATCACCGGCATTTTTGCCGGCCTGATGGCGCCGTTGTTGATCGCTTCCATCACGATCGTCTCCACGCTGGTCTTCCAGTCCTCCGGCCAGCCGGTCGCTTTCATCACGAGCATGCCGGCGTTCGTCCAAGCCTGGCTGGCCAAAGCCCAGGCCGGCATGGGCAGCGGTTTGCGCGAACATTTTGTCGCCGTCCTGCTGCTGGTGGCGACCATTCCTTTGACCATGCTGCTGGCCCGGGTGGTGGGCTATCTGAATACTTATTTTTTGCAATGGACGGCCATTCGCGCCATTACGGATTTGCGCACCAAACTGTTTTCGCACCTGCTCGGACTTTCCGCCGGTTTCTTCAGCAAAAGTCGCAGCGGCGAATTGATTTCGCGCATCATGAACGACACCGGCACACTGCAAAATGTCATCAGCGGCGCCACTTCCGTGATCGTGCGCGATCCCGTGACGTTGATCGGCCTGATCGCCGCCCTGCTTTGGCGGCAGCCGATGATGACGCTGATTTCCCTGGTGGTCATGCCGGCGTGCATGTTGCCGCTGATCATTTACAGCCGCAAAATTCGGCGCGCCAGCCGTGAAATGCAAAATCAAAGCGCCGATCTCGTGCAGGTGATGAACGAAGCCTTCACCGGCCACCGGGTCGTGAAGGGTTACAATCTTGAACACGTGGTTACCGATGAATTTCGCCAGACCGCGCGCAAGTCCATCGGCCAATACATGCGCATCATCCGCGCGAGCGAACTTTCCAGTCCGATCATTGATTTCCTGGCCTCCCTCGGCGTGGCGCTGGCGTTGCTCTACATGATTTATCTGGCCAAGACGCACCCGAATCCGGGCGATTTCATCCAGCTCGCCGGCAGTATCTTTTACATGTATGGGCCGATGAAAAACCTCACGCGCCTGCACAACCAGCTCACCCAGGCCCGCGCCGCCAGCGAACGCGTGTTTGAACTGCTGGCCACCGAAAACACGGTGCCGGAACCGGCCGCGCCCAAAATGTTGCACGCAGACAAGGCGGATATTGAATTCCAAAATCTCGATTTCAACTACGGCGAAAAACCGGTGTTGCGCAACGTCAGCCTCACGGTTAAAGCCGGCCAGTTGGTTGCGCTCGTCGGTGCGAGCGGCTCCGGAAAAACCACGCTGGCCAACCTGCTCCTGCGGTTTTATGACCCGACGCGGGGAGCCATCAAGATTGGCGGTGTGGATCTGCGCGAGGTCGCCACCCGGGACCTGCGCAACCAGATGGCGGTCGTGGCGCAGGAGAATGTTTTGTTCAACGACACCATTCGCCGGAACATTGAGATGGGCCGGCTGGGCGCCACGAACGAGGAAATCATCACCGCCGCCCGGCACGCGCATGCTTATGATTTCATCCTGCAAAAGGAGGACGGCTTCGACACCGTCATCGGCGAAAAAGGCGTGTCGCTTTCCGGCGGGCAACGGCAGCGCATCGCCATCGCCCGCGCGGTTCTGAGGAATGCGCCCATCCTGATCCTCGACGAAGCCACCAGCGCGCTGGACACCGAATCCGAACGCGCCGTGCAGGCGGCCCTGGACGAGCTGATGCAGGGCCGCACCACCGTTTGCATCGCCCACCGGCTTTCAACCATATTGCACGCCGACCTCATCGTGGTCCTGCAGGAGGGCCGGATCGTTGAACAGGGCCGGCACGAAGAACTGGTCCGGCGCGGCGGCGTTTATCAAAAACTTTACGAACTCCAGTTCAACGTGTAG
PROTEIN sequence
Length: 604
MIAFLNKLWEFARPYRWRLFLGVITGIFAGLMAPLLIASITIVSTLVFQSSGQPVAFITSMPAFVQAWLAKAQAGMGSGLREHFVAVLLLVATIPLTMLLARVVGYLNTYFLQWTAIRAITDLRTKLFSHLLGLSAGFFSKSRSGELISRIMNDTGTLQNVISGATSVIVRDPVTLIGLIAALLWRQPMMTLISLVVMPACMLPLIIYSRKIRRASREMQNQSADLVQVMNEAFTGHRVVKGYNLEHVVTDEFRQTARKSIGQYMRIIRASELSSPIIDFLASLGVALALLYMIYLAKTHPNPGDFIQLAGSIFYMYGPMKNLTRLHNQLTQARAASERVFELLATENTVPEPAAPKMLHADKADIEFQNLDFNYGEKPVLRNVSLTVKAGQLVALVGASGSGKTTLANLLLRFYDPTRGAIKIGGVDLREVATRDLRNQMAVVAQENVLFNDTIRRNIEMGRLGATNEEIITAARHAHAYDFILQKEDGFDTVIGEKGVSLSGGQRQRIAIARAVLRNAPILILDEATSALDTESERAVQAALDELMQGRTTVCIAHRLSTILHADLIVVLQEGRIVEQGRHEELVRRGGVYQKLYELQFNV*