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berkeley_reactor_200306_planktonic_scaffold_162563_60

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 70106..71107

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl transferase family 9 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG77_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 313.0
  • Bit_score: 270
  • Evalue 1.70e-69
Glycosyl transferase family 9 {ECO:0000313|EMBL:EEF61239.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 313.0
  • Bit_score: 270
  • Evalue 2.40e-69
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 313.0
  • Bit_score: 111
  • Evalue 2.80e-22

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGACACGCCCTCCCGCATTTTGGTGATCCGGCTCAAGTCCATCGGCGATGTGGCGTTCACGCTGCCGGCGGTCAATGTCATCCGCGACCATTTCCCATCGGCTGCGATCACCTTTCTGACTTCCCGGGAAAACGCGGCGATATTGCGCGGTTTCCGGGCGGTGAACGAGGTCATTGTCCTTGACCGCGCGGTGTTTCGCAGCGGCAATCCGCTGCGCGTGGTGCCGGAATTTTTTGGTTTGCTGCGCCGTTTGCGCGCCGGAAAATTTTCGCTGGTGGTGGATTTCCAAGGTTTCGGTGAAACCGCCTGGCTGGCGCGACTCACGGGCGCTCCGGCGCGCTGGGGCAGCGTGTATGGTGCCGGTCGGAGCTGGGCTTACACGCAAGGCTTCAACCGCCAACCCAACCTGCATCCGGCCGACTGGAATTTGCACCTGCTTGACCAGGCCGGATTGAAGCCCGGCGCGATCCGCAATGAATTTGAGCTGCCAGCCGACGTGCTGGACGCCGCCCGCGCCTTCCTGGCGGAAAACCGGCTGGCTTCCGACCGCCCGCTGCTGTTGATCCAACCGTTCACCAGTTCACCGCAAAAAAACTGGCCGCTGGAAAATTATCTCGCGGTGGCCCGCCACTGGCGGGCGCGCGGCGTGCAGATCGTTTTTGCGGGCGGACCGGCCGACCGCCCCGCCCTGGAACCCGCGGCGAACGAGGGCTTTTGCGTGGCGGCCGGCACAGCGCTGTTGGTCTCGGCGGGGCTGGCGAAACTGGCCACCCTGATGCTCGGCGGCGACACCGGTCTGGGACATCTGGCGGTGGCGCAAAACCGGCGCGTGGTGATGTTGATGATGCGCCAGCAACCCGGGGACTGCGTGCCGTTCCAGCATCCGGAATGGGTTGTTGCTCCGAAGCATTCGGAAAAAATTAACGACATCTCCGTGGAAACCGTGTTGCAAGCCACGGCGGACGCTTTCAACTCACCAGCCGGTAATGCTTCTTGTTGA
PROTEIN sequence
Length: 334
MDTPSRILVIRLKSIGDVAFTLPAVNVIRDHFPSAAITFLTSRENAAILRGFRAVNEVIVLDRAVFRSGNPLRVVPEFFGLLRRLRAGKFSLVVDFQGFGETAWLARLTGAPARWGSVYGAGRSWAYTQGFNRQPNLHPADWNLHLLDQAGLKPGAIRNEFELPADVLDAARAFLAENRLASDRPLLLIQPFTSSPQKNWPLENYLAVARHWRARGVQIVFAGGPADRPALEPAANEGFCVAAGTALLVSAGLAKLATLMLGGDTGLGHLAVAQNRRVVMLMMRQQPGDCVPFQHPEWVVAPKHSEKINDISVETVLQATADAFNSPAGNASC*