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berkeley_reactor_200306_planktonic_scaffold_161060_36

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 47667..48152

Top 3 Functional Annotations

Value Algorithm Source
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEC3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 151.0
  • Bit_score: 142
  • Evalue 3.30e-31
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EEF61637.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 151.0
  • Bit_score: 142
  • Evalue 4.70e-31
PTS system fructose subfamily transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 161.0
  • Bit_score: 101
  • Evalue 1.80e-19

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 486
ATGGGTCTTACAGATATTCTGGCGCCGGAAACTATTATCGCCGAATTGCGGGCAACGGATCGTTGGGGAACCATTGATGAACTCGTCGGCACGCTGGTGAACGCGGGCAAAATCAAACCGGCGGAGCGCGATTGCGTGGCGGCGGTGGTCAAGAAACGGGAGCTGGCCAATACGACCGGCGTCGGCGCGGGCGTGGCCTTTCCGACGGCCGCCGTGGAAATGATTGACCAGCCGGTGGTGGCGGTCGGGCGTTCGCGCCGGGGAATTCATTTTGAATCCCTGGACAAACGGCCGGTGACACTGGTCATGCTGGTTTTGGTGCCGGCGGGACAATATCACAAATTTGCCAGCCTCATTCAGAGCCTGGTGAAGCTTTTTTATTCGGCCGGGTTTCGTCAGTTGATCGCCACGGCCGCAGATGCCGGCGCCATTTACGGCCTGTTTTGCGAGCATCAGGACCAGTTGGCCACCGGGGAAGAGCCGTGA
PROTEIN sequence
Length: 162
MGLTDILAPETIIAELRATDRWGTIDELVGTLVNAGKIKPAERDCVAAVVKKRELANTTGVGAGVAFPTAAVEMIDQPVVAVGRSRRGIHFESLDKRPVTLVMLVLVPAGQYHKFASLIQSLVKLFYSAGFRQLIATAADAGAIYGLFCEHQDQLATGEEP*