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berkeley_reactor_200306_planktonic_scaffold_161060

Search features with annotation key words

Displaying items 31-60 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_161060_31
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37757..38845)
DNA (1089bp) protein (363aa)
Acriflavine resistance protein A n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7I5W8_LEGPN
lmxE; Acriflavine resistance protein A
Multidrug RND transporter {ECO:0000313|EMBL:KGP64269.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
berkeley_reactor_200306_planktonic_scaffold_161060_32
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(39833..41410)
DNA (1578bp) protein (526aa)
NodT family efflux transporter n=2 Tax=Legionella longbeachae RepID=D1RDA1_LEGLO
lprN; outer membrane efflux protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_161060_33
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(41622..43934)
DNA (2313bp) protein (771aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000313|EMBL:ACB76206.1}; EC=3.2.1.23 {ECO:0000313|EMBL:ACB76206.1};; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Beta-galactosidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY57_OPITP
berkeley_reactor_200306_planktonic_scaffold_161060_34
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

44313..45794
DNA (1482bp) protein (494aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMP2_9BACT
aspartyl/glutamyl-tRNA amidotransferase subunit B
berkeley_reactor_200306_planktonic_scaffold_161060_35
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

45873..47270
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM25_9BACT
UDP-N-acetylmuramate {ECO:0000313|EMBL:EEF59153.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
berkeley_reactor_200306_planktonic_scaffold_161060_36
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

47667..48152
DNA (486bp) protein (162aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEC3_9BACT
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EEF61637.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PTS system fructose subfamily transporter subunit IIC
berkeley_reactor_200306_planktonic_scaffold_161060_37
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

48221..49201
DNA (981bp) protein (327aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKW4_9BACT
berkeley_reactor_200306_planktonic_scaffold_161060_38
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

49343..51007
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ51_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58055.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_161060_39
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

51011..51847
DNA (837bp) protein (279aa)
Pseudouridine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ50_9BACT
Pseudouridine synthase {ECO:0000313|EMBL:EEF58054.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pseudouridine synthase
berkeley_reactor_200306_planktonic_scaffold_161060_40
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(51867..52763)
DNA (897bp) protein (299aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ornithine carbamoyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ49_9BACT
argF; Ornithine carbamoyltransferase
berkeley_reactor_200306_planktonic_scaffold_161060_41
unknown

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52868..53062
DNA (195bp) protein (65aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_161060_42
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(53303..53980)
DNA (678bp) protein (226aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDY8_9BACT
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EEF61879.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PAP2 family protein
berkeley_reactor_200306_planktonic_scaffold_161060_43
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(53977..54891)
DNA (915bp) protein (305aa)
Fatty acid desaturase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDY9_9BACT
Fatty acid desaturase {ECO:0000313|EMBL:EEF61880.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
conserved hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_44
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

55072..56190
DNA (1119bp) protein (373aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ0_9BACT
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:EEF61881.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
kshA; Rieske family iron-sulfur cluster-binding protein
berkeley_reactor_200306_planktonic_scaffold_161060_45
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

56187..56792
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61882.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_46
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

56808..57833
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61883.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_161060_47
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(57739..58581)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXE5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20943.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_161060_48
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

58810..60240
DNA (1431bp) protein (477aa)
Radical SAM domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ3_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EEF61884.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_49
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

60240..61595
DNA (1356bp) protein (452aa)
Radical SAM domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ4_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EEF61885.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_50
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

61565..62680
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61886.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_51
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

62677..63414
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61887.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_52
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

63599..65035
DNA (1437bp) protein (479aa)
GH3 auxin-responsive promoter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ7_9BACT
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EEF61888.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
GH3 auxin-responsive promoter
berkeley_reactor_200306_planktonic_scaffold_161060_53
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(64938..66749)
DNA (1812bp) protein (604aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase L chain ATP-binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBE8_9BACT
berkeley_reactor_200306_planktonic_scaffold_161060_54
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

66848..68071
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62920.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_trna_1
unknown

Not on your lists

68120..68201
DNA (82bp)
transferRNA Leu
berkeley_reactor_200306_planktonic_scaffold_161060_55
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

68484..69383
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCG9_9BACT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEF62637.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Co/Zn/Cd cation transporter
berkeley_reactor_200306_planktonic_scaffold_161060_56
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

69380..70285
DNA (906bp) protein (302aa)
Methyltransferase small n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMY3_9BACT
Methyltransferase small {ECO:0000313|EMBL:EEF58779.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_161060_57
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

70472..71233
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBS6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62961.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_161060_58
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

71239..71916
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF45_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61543.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
N-terminal cleavage protein
berkeley_reactor_200306_planktonic_scaffold_161060_59
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

72181..73977
DNA (1797bp) protein (599aa)
Extracellular solute-binding protein family 5 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBN6_9BACT
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EEF62921.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ddpA; peptide ABC transporter peripolasmic protein
Displaying items 31-60 of 92 in total

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