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berkeley_reactor_200306_planktonic_scaffold_161060_53

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(64938..66749)

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 604.0
  • Bit_score: 1023
  • Evalue 1.10e-295
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5) similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 596.0
  • Bit_score: 733
  • Evalue 2.70e-209
Carbamoyl-phosphate synthase L chain ATP-binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBE8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 604.0
  • Bit_score: 1023
  • Evalue 8.00e-296

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1812
ATGGCGAATTTGATTTTGTCCATGTCGCCACTCAACGCTGAAAAACTCGCCCAGGCCAAGTCGCTCGGATTTTCCGACCGGCAAATCGCTCATTTAACCGGTTCCACTGAAGACGAAGTCCGCGCGCTGCGCAAGCAACTGAACCTCGTGCCCAGCTATCGCCTGGTGGACACCTGCGCCGCCGAATTCGAGGCTTACACGCCTTACTATTATTCCACCTACGATCGCGGTGACGACGAGGTCAAGGGCAACACCGCCAAAAAAGTCATGATTCTCGGCGGCGGCCCCAACCGCATCGGCCAGGGCATTGAATTCGATTACTGCTGCGTTCACGCCGCGTTCGCGCTCAAGGAAGACGGTTTCGAAACCATCATGGTGAACTCGAACCCGGAAACGGTTTCCACCGACTACGACACCAGCGACAAGCTGTTCTTCGAGCCGCTCACGCTCGAAGACGTGCTGCATATTTACGAACGCGAAAAATGCTGGGGCGCCATCGCACAGTTCGGCGGGCAGACGCCGCTGAACCTCGCGCTCGGCCTGCAAAAAAACGGCGTCAACATCATCGGCACCTCGCCGCAGAGCATCGAAATCGCCGAAGACCGCAAGCTGTTCGCGGCCATGCTGAACAAACTGAACATTCCGCAGCCGCCCAACGGCCTGGCGACGAATCCCGAGGAAGCGCTCGTGATTTCCCAGCGTTTGACCTATCCCGTGCTCGTCCGCCCCAGCTTCGTGCTCGGCGGTCGCGCGATGCAGATTGTGTATTCCGACAGCGAGTTGTCGCATTACATGAAGTTTGCTGTGGAAGCTTCGCCGGAACGGCCGGTGTTGGTGGACAAATTTTTGGAAGACGCCACCGAAGTGGATGTGGACTGCATTGCGGACGTCGGCCTGCCGAACGGCGGCACGATCGTCATTGGCGGCATGTTGGAGCACATCGAGTTTGCCGGCGTGCATTCCGGCGACGCCGCGATGGTGCTGCCGCCGCATTCGCTTTCCCGGAAGGCGATTGACACCATCCGTGAATACACGCACGCGATGGCGAAGGAATTGAAGGTCGTCGGCCTGATGAACGTGCAATACGCCGTGAAAGACGAAGTGGTTTACGTGCTCGAAGTGAATCCACGCGCCTCGCGCACCGTGCCGTTCGTGAGCAAGGCTATCGGCCAGCCGCTCGCGAAAATTGCCGCGAAAGTCATGGCCGGCAAAACCTTGAAAGAACTCGGGTTCACCGAGGAAATCTGGCCGAAGTATTGGGCGGTGAAGGAATCCGTTTTCCCGTTCAGCCGGTTTCACGGACAGGACATTTTGCTCTCGCCGGAAATGCGTTCCACCGGCGAAGTCATGGGCCTGGACGCGGATCTTGGCACGGCTTACGCCAAGTCGCAGATGGCGGCCAATTCCGCGCTGCCGCTGTCCGGCAAGGTGTTCATCAGCGTCAGCGACCTGCACAAGGACGAAGTGGCGGAGGTGGCCAAACAATATACCGACCTTGGTTTCCAACTCATCGCCACCGGCGGCACGGCGACGATTCTGGAAAAAGCCGGATTAAAGGTGGAGCGGATTCACAAATTGCAGGAAGGCCGTCCCAACGCGGTGGACCTGCTCAAGAACAAGGAAATCCAGCTCGTCATCAACACGCCCAGCGGCGCGGTGCCGCGCGCGGATGAAGTGAAAATCCGCACCACGGCCGTTTACACCAACACGCCCATCATGACCACTCTCTCCAGCGCCCGCGCCGGCGCGCTCGGCATCGCCGCGCTGAAGAAGGCCGGTTACAGTGTGAAGACGGTGCAGGAGTATCATTGA
PROTEIN sequence
Length: 604
MANLILSMSPLNAEKLAQAKSLGFSDRQIAHLTGSTEDEVRALRKQLNLVPSYRLVDTCAAEFEAYTPYYYSTYDRGDDEVKGNTAKKVMILGGGPNRIGQGIEFDYCCVHAAFALKEDGFETIMVNSNPETVSTDYDTSDKLFFEPLTLEDVLHIYEREKCWGAIAQFGGQTPLNLALGLQKNGVNIIGTSPQSIEIAEDRKLFAAMLNKLNIPQPPNGLATNPEEALVISQRLTYPVLVRPSFVLGGRAMQIVYSDSELSHYMKFAVEASPERPVLVDKFLEDATEVDVDCIADVGLPNGGTIVIGGMLEHIEFAGVHSGDAAMVLPPHSLSRKAIDTIREYTHAMAKELKVVGLMNVQYAVKDEVVYVLEVNPRASRTVPFVSKAIGQPLAKIAAKVMAGKTLKELGFTEEIWPKYWAVKESVFPFSRFHGQDILLSPEMRSTGEVMGLDADLGTAYAKSQMAANSALPLSGKVFISVSDLHKDEVAEVAKQYTDLGFQLIATGGTATILEKAGLKVERIHKLQEGRPNAVDLLKNKEIQLVINTPSGAVPRADEVKIRTTAVYTNTPIMTTLSSARAGALGIAALKKAGYSVKTVQEYH*