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berkeley_reactor_200306_planktonic_scaffold_161060_44

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 55072..56190

Top 3 Functional Annotations

Value Algorithm Source
Rieske (2Fe-2S) domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 332.0
  • Bit_score: 375
  • Evalue 3.20e-101
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:EEF61881.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 332.0
  • Bit_score: 375
  • Evalue 4.40e-101
kshA; Rieske family iron-sulfur cluster-binding protein similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 347.0
  • Bit_score: 163
  • Evalue 7.00e-38

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1119
ATGAACAAACGCATCCACAACCAAAGCCCGGACGTGGCAGGCATGCCAGCGCCGCCGGCCGCGGACCAGTTTCCAGAATTCCCCGCTTCCTGGTATTTATTTTGCCATTCACGCGATTTGGCAAAACCGTTGTCAAAGCGCATTCTTGGTCGGCAACTGGTCGCATTCCGCACCCGGAACGGCAAGGTCAGCATCATGACAGCCAACTGTTCGCACATGGGCGCGGACCTGGGTTGCGGCAACGTGATCGGCGATTCCATCCAATGTCCGTTTCACAATTGGAAATACGGCGCCGACGGCGTTTGCAATCATATTCCGGGCACGAAGGTCATTCCCCTATTTGCGCGGCAAGAGCGTTATCCGGTGGAAGAGAGGCACGGTTATGTTTTCTTTTTCAATGGGCCGAAAGCGTTATTTCCATTGCCATTTTTCTGGGGCGCCAATCCCGATGATTTTTGCGCGGGAAAAATATTTTCCTATGTTTCGGACTGCAACTGGTTTGTGAATGCGGCGCACGGTTATGACGTTCAGCATTTTGACGCCGTCCACGACCGCAAGCTGGTTGAGCCACCGCGGATTGACTGTCCTCATCCGTTCGCGCGGCGCAACACCTATCGGGCGGAAGTTTTGGGCCGCACCAAGCTGGACAAGTTTCTGAAAATTTTTGCGGGTCGCCACGTTGAAATCTGCATTACAAACTGGGGTGGGACATTTGTCACAATCACCGGGGCTTTCGACCGTGCGCACAGCCGTTTCATCATTGCCACGCAACCCCTCGACGGCAACAAAACACTTTGCGAAGGCATCGTATTCGCTCCGCGCATCAAAAACCCAATCGCGCACGCCGTGCTTGCGCCGCTGATGCTGGCGACACGCCGATTCTTTACGCATGGCTACTTAAAAGACGAATCGAATCGGTTGCTTGGCACGCGTTACAATCCCAACACGATGATTCCGCACGACCGCGACATGATTGATTTCTTTAACTGGGTTACACGCCTGCCGCAAACTGCCGATGATGCGATTCGTATTTCAAAACACCTTGCGCAAGAAGACACATCAGAATCCATTTCTTTCGTTTCCCAACAACCCCAAACACTCGTCGGCGAACACCCATGA
PROTEIN sequence
Length: 373
MNKRIHNQSPDVAGMPAPPAADQFPEFPASWYLFCHSRDLAKPLSKRILGRQLVAFRTRNGKVSIMTANCSHMGADLGCGNVIGDSIQCPFHNWKYGADGVCNHIPGTKVIPLFARQERYPVEERHGYVFFFNGPKALFPLPFFWGANPDDFCAGKIFSYVSDCNWFVNAAHGYDVQHFDAVHDRKLVEPPRIDCPHPFARRNTYRAEVLGRTKLDKFLKIFAGRHVEICITNWGGTFVTITGAFDRAHSRFIIATQPLDGNKTLCEGIVFAPRIKNPIAHAVLAPLMLATRRFFTHGYLKDESNRLLGTRYNPNTMIPHDRDMIDFFNWVTRLPQTADDAIRISKHLAQEDTSESISFVSQQPQTLVGEHP*