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berkeley_reactor_200306_planktonic_scaffold_161060_59

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 72181..73977

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 5 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBN6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 594.0
  • Bit_score: 713
  • Evalue 1.00e-202
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EEF62921.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 594.0
  • Bit_score: 713
  • Evalue 1.40e-202
ddpA; peptide ABC transporter peripolasmic protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 601.0
  • Bit_score: 430
  • Evalue 4.90e-118

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1797
ATGAAAATAAATTCCGTTTCCCTCTTCCCTCTTTTTGCCGGCGCCGTCCTGCTGGCCGGCTGCGGAAAAAATAATTCGACCGCCGCGCCGGAAAAATCCGCCGCCAGTTATCCGCTGGCGAAACCGCCGCTGCTGGCACCGTGTTCGCCGGGAAAACCCGGCGGCCGGCTCGTGGTGGCGACGTTTGGCGATCCGAAAACCTTCAATCCCATCACCGCCAACGAATCGTCGTCGCAGGACATCTACCGGCTGCTGTTCGCTTCGTTGCTGGGCTTCGACTGGCCTTCGCAATCCGTGACGCCGGGGCTGGCGGATTGGTGGACGAATTCGCCGGATGGCAAAACCTGGACGTTCCGCCTGCGCCAGAATCTGCATTGGAGCGACGGCGCGCCGTTGACGGCGGACGACGTGGTGTTCACCTGGGACGCCATCAGCAATCCCAAAAACAACAACGTCACGTTCGATTTGTTCGTCATCAACGGGAAGAGTTTTACGGTGAAGAAACTGGATGACCGGACGGTGCAGGTCGTCACGCCGGAAGTTTACGCGGCGTTCCTGGAAAATTTTGGCGCGGGCCTGCCCATCCTGCCGCAGCACGTGTTGCAGGCGGCGGCGACCAACGGAACCTTCGCCTCGGCCTACGGCACCGATACGCCTGCCAAGGACATTGTCTGCAGCGGGCCTTTCATCATCCAACAATACAAACCGTCGCAATACACGCTGATGACGCGCAATCCCTATTTCTTCGAGGTGGACAGCAACGGCCAGCGCCTGCCGTATTTTGACAACGTGATTTACACCGTGGTGCCGGACATGAACGCGGTGTCGCTGCGGATGCTCACCGGCGAGAGCGACGCGGATGATTTCATTCTGCCCTACGATTATGACCGGTTCAAAGCGGCGGCGGCCCAGGGTAATTTCACTTTTGAAGAACCGGGCGTCGGCCTGGAAAACAGTTTTTTCTGGTTCAACGAAAACACCAACGTGAACGCCAAAACCGGCGAACCTTATGTGGATCCGGTGAAGTTGAAGTGGTTCCGCAATGTGAAATTCCGGCAGGCGTGCTCGTATGCGATTGACCGGGACGCCATCGTCAATTCCGTCTATTCCGGTCGGGCGATACCCGCCTATGGTTTCGTCACGCCGGGCAATAAAAAGTGGTATAACCCGAACATCCAAAAATATCCGCACGACCTCGCCAAGGCGCGCGCGCTGTTGCAGGAAATCGGCATCGCGGATCGCAACGGCGACGGCGTCCTGGAAGACGCGGATGGACATCCCGTTGAATTCGTGCTGAACACCAACACCGGCAACGACGCCCGGCAAAAGGTGGCCGTGCTGATCCAGTCCGATCTGGAAAAGCTGGGCATGAAAGTGATCTGCCAGCCGATTGAGTTCAACACGCTGGTTAGCAAGATTGACGACACCTACGATTACGACTGCGTGCTGCTGGGGCTGGCCGGCGGCGGCACCGATCCGTCGGGCATGATGAACGTCGTCAAATCCAGCGGCTTCACGCATCAATGGTTTCCGCGCCAGAAAACACCTTCCACGCCGTGGGAAGCCCGGCTTGATGAGCTGATGGATGCCCAGCTGAAAACGCTGGATTATCCGACGCGCAAAAAATATTTCGACGAAGTGCAGCAGATTCTGGCCGAGGAAGTGCCGATGATCTACACGGTGACGCCGTATTATTATGCGGCCATTCGCTCGGACGTGGGCAACGTGCGCGCGACACCGCTGAGTCCCTACCGCGTCACCTGGAACGCCGAGGAATTGTATTTCCAGAAACCATAG
PROTEIN sequence
Length: 599
MKINSVSLFPLFAGAVLLAGCGKNNSTAAPEKSAASYPLAKPPLLAPCSPGKPGGRLVVATFGDPKTFNPITANESSSQDIYRLLFASLLGFDWPSQSVTPGLADWWTNSPDGKTWTFRLRQNLHWSDGAPLTADDVVFTWDAISNPKNNNVTFDLFVINGKSFTVKKLDDRTVQVVTPEVYAAFLENFGAGLPILPQHVLQAAATNGTFASAYGTDTPAKDIVCSGPFIIQQYKPSQYTLMTRNPYFFEVDSNGQRLPYFDNVIYTVVPDMNAVSLRMLTGESDADDFILPYDYDRFKAAAAQGNFTFEEPGVGLENSFFWFNENTNVNAKTGEPYVDPVKLKWFRNVKFRQACSYAIDRDAIVNSVYSGRAIPAYGFVTPGNKKWYNPNIQKYPHDLAKARALLQEIGIADRNGDGVLEDADGHPVEFVLNTNTGNDARQKVAVLIQSDLEKLGMKVICQPIEFNTLVSKIDDTYDYDCVLLGLAGGGTDPSGMMNVVKSSGFTHQWFPRQKTPSTPWEARLDELMDAQLKTLDYPTRKKYFDEVQQILAEEVPMIYTVTPYYYAAIRSDVGNVRATPLSPYRVTWNAEELYFQKP*